RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	PLAG1	Q6DJT9	500 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	FCRL6	Q6DN72	434 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	TAPT1	Q6NXT6	567 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	SPOCD1	Q6ZMY3	1216 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	KIAA0408	Q6ZU52	694 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	CIR1	Q86X95	450 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	C1QL4	Q86Z23	238 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	MB21D1	Q8N884	522 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	SYT8	Q8NBV8	401 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	FAM71B	Q8TC56	605 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	RAPGEF4	Q8WZA2	1011 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	TBC1D20	Q96BZ9	403 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	EID2B	Q96D98	161 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	C18orf8	Q96DM3	657 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	SLC46A1	Q96NT5	459 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	TRIB1	Q96RU8	372 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	DCLRE1C	Q96SD1	692 aa	Known RBP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	MNT	Q99583	582 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	NAP1L4	Q99733	375 aa	Known RBP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	PAGR1	Q9BTK6	254 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	MAF1	Q9H063	256 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	RNPEP	Q9H4A4	650 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	HEYL	Q9NQ87	328 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	MRPS18A	Q9NVS2	196 aa	Known RBP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	DACT1	Q9NYF0	836 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	ANAPC4	Q9UJX5	808 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	ATP11B	Q9Y2G3	1177 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	GPR52	Q9Y2T5	361 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	PCDHGB3	Q9Y5G1	929 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
FN1-222	ENST00000485567	RAD54B	Q9Y620	910 aa		4.83	□□□□□ -1.64
FN1-222	ENST00000485567	AQP7P3	A6NL99	342 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	RAB27B	O00194	218 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	DCLK1	O15075	740 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	CYP27B1	O15528	508 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	GPR42	O15529	346 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	SH3BP5	O60239	455 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	VPS4B	O75351	444 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	C8A	P07357	584 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	ITGA5	P08648	1049 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	DHRS4L1	P0CG22	281 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	TPH1	P17752	444 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	POLE2	P56282	527 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	ARL4C	P56559	192 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	MGAT5B	Q3V5L5	792 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	MAMDC4	Q6UXC1	1216 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	TMPRSS9	Q7Z410	1059 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	SGMS1	Q86VZ5	419 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	ANKRD18A	Q8IVF6	992 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	PSD4	Q8NDX1	1056 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	GCC1	Q96CN9	775 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	LRIG1	Q96JA1	1093 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	PHACTR3	Q96KR7	559 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	KCNC2	Q96PR1	638 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	NEU1	Q99519	415 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	MAGEH1	Q9H213	219 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	PRDM16	Q9HAZ2	1276 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	ZBTB26	Q9HCK0	441 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	VSX1	Q9NZR4	365 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-222	ENST00000485567	CTTNBP2NL	Q9P2B4	639 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	IGSF9	Q9P2J2	1179 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	CDYL	Q9Y232	598 aa		4.82	□□□□□ -1.64
FN1-222	ENST00000485567	SPATA31A3	Q5VYP0	1347 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567		A0A1B0GTW7	788 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	LEFTY2	O00292	366 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	ACKR2	O00590	384 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	SPATA31D3	P0C874	917 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	KCNA2	P16389	499 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	EGR1	P18146	543 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	TXK	P42681	527 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	GCLC	P48506	637 aa	Predicted RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	DGKE	P52429	567 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	ITGA8	P53708	1063 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	LOXL3	P58215	753 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	SLC5A9	Q2M3M2	681 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	TRIM71	Q2Q1W2	868 aa	Known RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF750	Q32MQ0	723 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	TANGO2	Q6ICL3	276 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	TAF2	Q6P1X5	1199 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	FOXR2	Q6PJQ5	311 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	LAYN	Q6UX15	382 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567		Q6ZSN1	163 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	SPATA31D4	Q6ZUB0	917 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	SIAH1	Q8IUQ4	282 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567		Q8NA96	180 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	ATG16L2	Q8NAA4	619 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	OR56A1	Q8NGH5	318 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF483	Q8TF39	744 aa	Predicted RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	FAM89A	Q96GI7	184 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	PTDSS2	Q9BVG9	487 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	TTYH3	Q9C0H2	523 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	LRFN1	Q9P244	771 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	DNMT3B	Q9UBC3	853 aa	Known RBP	4.81	□□□□□ -1.64
FN1-222	ENST00000485567	HSFX1	Q9UBD0	423 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	GRHPR	Q9UBQ7	328 aa		4.81	□□□□□ -1.64

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