RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CISHQ9NSE2 258 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 TRIOO75962 3097 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 TEX33O43247 280 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 TACC1O75410 805 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 P4HA1P13674 534 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 IL9P15248 144 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 CYP2F1P24903 491 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PON1P27169 355 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 NTHL1P78549 312 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 TSPY1Q01534 308 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 GPR17Q13304 367 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 LIN9Q5TKA1 542 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PPFIBP1Q86W92 1011 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 EHBP1Q8NDI1 1231 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 TAF4BQ92750 862 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 NRG2O14511 850 aaPredicted RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 EPHB6O15197 1021 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 CILPO75339 1184 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 BDNFP23560 247 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 PCSK1P29120 753 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ELF1P32519 619 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 TWF1Q12792 350 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 CETN1Q12798 172 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 ARHGAP44Q17R89 818 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 SIX2Q9NPC8 291 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
APTX-227ENST00000485479 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 YIPF1Q9Y548 306 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
APTX-227ENST00000485479 MYH10P35580 1976 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 ADORA2BP29275 332 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 DDR2Q16832 855 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 PPM1LQ5SGD2 360 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 ZNF707Q96C28 371 aaPredicted RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 S1PR5Q9H228 398 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 FAM207AQ9NSI2 230 aaPredicted RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 LIMA1Q9UHB6 759 aaKnown RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 AFF4Q9UHB7 1163 aaKnown RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
APTX-227ENST00000485479 USP15Q9Y4E8 981 aaPredicted RBP12.66□□□□□ -0.38
APTX-227ENST00000485479 RNF225M0QZC1 329 aaPredicted RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 P4HA2O15460 535 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 ATF6P18850 670 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PAX3P23760 479 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 UBXN1Q04323 297 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 GRASPQ7Z6J2 395 aaPredicted RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 SCN4BQ8IWT1 228 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 JAKMIP2Q96AA8 810 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 SFXN1Q9H9B4 322 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 CEP72Q9P209 647 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 FHOD1Q9Y613 1164 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PTPRDP23468 1912 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 GOLGA6L19H0YKK7 550 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PMM2O15305 246 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 ZMYND10O75800 440 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 USP8P40818 1118 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 ZNF445P59923 1031 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 INCA1Q0VD86 236 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 IFRD2Q12894 506 aaPredicted RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 MTMR3Q13615 1198 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 SYCP1Q15431 976 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 DPY19L2P1Q6NXN4 242 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 FAM171BQ6P995 826 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 DCP1BQ8IZD4 617 aaKnown RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 SLC2A14Q8TDB8 520 aa12.65□□□□□ -0.38
APTX-227ENST00000485479 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
APTX-227ENST00000485479 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms