RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ZNF205O95201 554 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SGPL1O95470 568 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PARP1P09874 1014 aaKnown RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 MTHFD2P13995 350 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 ABCB4P21439 1286 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 TNFAIP3P21580 790 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 KIF5BP33176 963 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PPM1AP35813 382 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PIK3CBP42338 1070 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PREPP48147 710 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 GNAQP50148 359 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SLC5A3P53794 718 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PCBP3P57721 371 aaKnown RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 ANTXR2P58335 489 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 TRAF1Q13077 416 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 KCTD2Q14681 263 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 CNN3Q15417 329 aaKnown RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 RTP2Q5QGT7 225 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SYNE3Q6ZMZ3 975 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 KCTD1Q719H9 257 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 CEP68Q76N32 757 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 GPR142Q7Z601 462 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PLEKHH3Q7Z736 793 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 DAAM2Q86T65 1068 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 KRT78Q8N1N4 520 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 PRR18Q8N4B5 295 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 CCDC89Q8N998 374 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 CHST13Q8NET6 341 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 LRTOMTQ8WZ04 291 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 LZTS2Q9BRK4 669 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 MOV10L1Q9BXT6 1211 aaKnown RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 AGXT2Q9BYV1 514 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 MYLK2Q9H1R3 596 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 RANBP17Q9H2T7 1088 aaKnown RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 AP5S1Q9NUS5 200 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 FBXO28Q9NVF7 368 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 GPRC5BQ9NZH0 403 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 BTBD7Q9P203 1132 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 GJD2Q9UKL4 321 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 CTDP1Q9Y5B0 961 aaPredicted RBP6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SNX13Q9Y5W8 968 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 TAF6LQ9Y6J9 622 aa6.24□□□□□ -1.41
NHLRC3-205ENST00000485407 SMCHD1A6NHR9 2005 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CCDC196A0A1B0GTZ2 297 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CCDC69A6NI79 296 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 H7BY64 318 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 SH2B2O14492 632 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 KPNA5O15131 536 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 NKRFO15226 690 aaKnown RBP eCLIP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 TIMM44O43615 452 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 LEFTY1O75610 366 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RNASEH2AO75792 299 aaKnown RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ALDH2P05091 517 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ICAM1P05362 532 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 HOXC6P09630 235 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 FCER1AP12319 257 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 HSD3B1P14060 373 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ELNP15502 786 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 TNFSF4P23510 183 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CTGFP29279 349 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RGS2P41220 211 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 EVCP57679 992 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 TNK2Q07912 1038 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 IKQ13123 557 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 GRB14Q14449 540 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 GRM4Q14833 912 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ADCK5Q3MIX3 580 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ANO6Q4KMQ2 910 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 PRR16Q569H4 304 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 DGKKQ5KSL6 1271 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 NKAPLQ5M9Q1 402 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CC2D1AQ6P1N0 951 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RUFY3Q7L099 469 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 KCNK18Q7Z418 384 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 MSL3Q8N5Y2 521 aaKnown RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 GIMAP7Q8NHV1 300 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CTCFLQ8NI51 663 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RAET1EQ8TD07 263 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 USP6NLQ92738 828 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 KIAA1191Q96A73 305 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RAX2Q96IS3 184 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 TBATAQ96M53 351 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ASB2Q96Q27 587 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 CGRRF1Q99675 332 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 DUSP23Q9BVJ7 150 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ARHGAP39Q9C0H5 1083 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 PORCNQ9H237 461 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 ALDH8A1Q9H2A2 487 aaPredicted RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 RIOX1Q9H6W3 641 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 LY9Q9HBG7 655 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 DMRT3Q9NQL9 472 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 PDLIM7Q9NR12 457 aa6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 USP36Q9P275 1121 aaKnown RBP6.23□□□□□ -1.41
NHLRC3-205ENST00000485407 MAD2L2Q9UI95 211 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms