RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PKMYT1Q99640 499 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 DUSP9Q99956 384 aaKnown RBP17.36■□□□□ 0.37
DDR1-246ENST00000485023 SDCBP2Q9H190 292 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 DPEP3Q9H4B8 488 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 KCNK12Q9HB15 430 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 CRTAC1Q9NQ79 661 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDR1-246ENST00000485023 SORCS3Q9UPU3 1222 aa17.36■□□□□ 0.37
DDR1-246ENST00000485023 A8MXQ7 604 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 TACC1O75410 805 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 HAPLN1P10915 354 aaPredicted RBP17.35■□□□□ 0.37
DDR1-246ENST00000485023 CYP2F1P24903 491 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 GNL1P36915 607 aaPredicted RBP17.35■□□□□ 0.37
DDR1-246ENST00000485023 TUFMP49411 452 aaKnown RBP17.35■□□□□ 0.37
DDR1-246ENST00000485023 MXI1P50539 228 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 ZXDAP98168 799 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 CYP27A1Q02318 531 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 ORC1Q13415 861 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 VEPH1Q14D04 833 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 SGSM1Q2NKQ1 1148 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 CCDC40Q4G0X9 1142 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 PRSS36Q5K4E3 855 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 TTI2Q6NXR4 508 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 TRIML1Q8N9V2 468 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 IMPG2Q9BZV3 1241 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 TMEM8AQ9HCN3 771 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 ZNF334Q9HCZ1 680 aaPredicted RBP17.35■□□□□ 0.37
DDR1-246ENST00000485023 C11orf16Q9NQ32 467 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 EPS15L1Q9UBC2 864 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 ARMCX3Q9UH62 379 aaPredicted RBP17.35■□□□□ 0.37
DDR1-246ENST00000485023 CDH9Q9ULB4 789 aa17.35■□□□□ 0.37
DDR1-246ENST00000485023 BICDL2A1A5D9 508 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 GOLGA6L22H0YM25 854 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 ASS1P00966 412 aaKnown RBP17.34■□□□□ 0.37
DDR1-246ENST00000485023 NOP14P78316 857 aaKnown RBP17.34■□□□□ 0.37
DDR1-246ENST00000485023 TAF12Q16514 161 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 DDR2Q16832 855 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 KRT39Q6A163 491 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 TMC8Q8IU68 726 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 GPT2Q8TD30 523 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 EDAQ92838 391 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 C1QTNF1Q9BXJ1 281 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 VRTNQ9H8Y1 702 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
DDR1-246ENST00000485023 A0A1W2PRU2 124 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 NARSO43776 548 aaKnown RBP17.33■□□□□ 0.36
DDR1-246ENST00000485023 P4HA1P13674 534 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 PLA2G5P39877 138 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 ASPAP45381 313 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 SMARCB1Q12824 385 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 HTR4Q13639 388 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 TEAD2Q15562 447 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 CBWD6Q4V339 395 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 CBWD3Q5JTY5 395 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 TMEM31Q5JXX7 168 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 CBWD5Q5RIA9 395 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 POTEHQ6S545 545 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 PARM1Q6UWI2 310 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 DNAJB7Q7Z6W7 309 aaPredicted RBP17.33■□□□□ 0.36
DDR1-246ENST00000485023 ITIH5Q86UX2 942 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 TAF4BQ92750 862 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 SEMA4DQ92854 862 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 FGF14Q92915 247 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 PSMG2Q969U7 264 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 KXD1Q9BQD3 176 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 APOBEC3GQ9HC16 384 aaKnown RBP17.33■□□□□ 0.36
DDR1-246ENST00000485023 HSFX1Q9UBD0 423 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 HMGXB4Q9UGU5 601 aa17.33■□□□□ 0.36
DDR1-246ENST00000485023 MAGED2Q9UNF1 606 aaPredicted RBP17.33■□□□□ 0.36
DDR1-246ENST00000485023 DOCK6Q96HP0 2047 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 ZNF197O14709 1029 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 STX10O60499 249 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 MOSPD3O75425 235 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 CD58P19256 250 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 BDNFP23560 247 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 GABRR2P28476 465 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 GTF2H1P32780 548 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 ENPEPQ07075 957 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 TDGQ13569 410 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 STXBP5Q5T5C0 1151 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 FAM171BQ6P995 826 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 C4orf50Q6ZRC1 276 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 TRIM67Q6ZTA4 783 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 SHKBP1Q8TBC3 707 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 MYCBPAPQ8TBZ2 947 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 PCED1BQ96HM7 432 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 CEP63Q96MT8 703 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 RPP25Q9BUL9 199 aaKnown RBP17.32■□□□□ 0.36
DDR1-246ENST00000485023 LRRC3Q9BY71 257 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 AVENQ9NQS1 362 aaPredicted RBP17.32■□□□□ 0.36
DDR1-246ENST00000485023 IGSF9Q9P2J2 1179 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
DDR1-246ENST00000485023 ZFP37Q9Y6Q3 630 aaPredicted RBP17.32■□□□□ 0.36
DDR1-246ENST00000485023 NCOR1O75376 2440 aa17.32■□□□□ 0.36
DDR1-246ENST00000485023 PTPN1P18031 435 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms