RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 EEFSECP57772 596 aaKnown RBP5.27□□□□□ -1.57
SMC4-215ENST00000484799 ANAPC15P60006 121 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 EXOSC9Q06265 439 aaKnown RBP5.27□□□□□ -1.57
SMC4-215ENST00000484799 FOXF2Q12947 444 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 ANKRD16Q6P6B7 361 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 WDR53Q7Z5U6 358 aaPredicted RBP5.27□□□□□ -1.57
SMC4-215ENST00000484799 CATIPQ7Z7H3 387 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 GRAMD1CQ8IYS0 662 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 PRR18Q8N4B5 295 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 KLHDC4Q8TBB5 520 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 RFKQ969G6 155 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 MVB12AQ96EY5 273 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 ZSCAN32Q9NX65 697 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 IP6K2Q9UHH9 426 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 CPA4Q9UI42 421 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 PCDHA6Q9UN73 950 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 PLEKHM1Q9Y4G2 1056 aa5.27□□□□□ -1.57
SMC4-215ENST00000484799 PRSS29PA6NIE9 313 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 SMIM22K7EJ46 135 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 OFD1O75665 1012 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 ZRANB2O95218 330 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC4-215ENST00000484799 DRD4P21917 467 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 GTF2H3Q13889 308 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 PTPROQ16827 1216 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 TREML2Q5T2D2 321 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 ARHGAP40Q5TG30 622 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 VPS53Q5VIR6 699 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 PPP1R3BQ86XI6 285 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC4-215ENST00000484799 TBC1D5Q92609 795 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 SLC35A4Q96G79 324 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 PTDSS2Q9BVG9 487 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 DPCDQ9BVM2 203 aaPredicted RBP5.26□□□□□ -1.57
SMC4-215ENST00000484799 ARMT1Q9H993 441 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 GLOD4Q9HC38 313 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 SERTAD3Q9UJW9 196 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 SHOC2Q9UQ13 582 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 TMX2Q9Y320 296 aa5.26□□□□□ -1.57
SMC4-215ENST00000484799 GRPP07492 148 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 CELA2AP08217 269 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 PIM1P11309 404 aaPredicted RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 XRCC6P12956 609 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMC4-215ENST00000484799 CERS1P27544 350 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 SOX8P57073 446 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 LOXL3P58215 753 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 PLS1Q14651 629 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 BRDTQ58F21 947 aaPredicted RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 MTX3Q5HYI7 312 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 AARS2Q5JTZ9 985 aaKnown RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 TMEM240Q5SV17 173 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 IFIT1BQ5T764 474 aaKnown RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 XAGE5Q8WWM1 108 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 NAF1Q96HR8 494 aaKnown RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 MRPS18AQ9NVS2 196 aaKnown RBP5.25□□□□□ -1.57
SMC4-215ENST00000484799 ADAM21Q9UKJ8 722 aa5.25□□□□□ -1.57
SMC4-215ENST00000484799 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMC4-215ENST00000484799 AOX1Q06278 1338 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 LINC01548A6NM66 108 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 INO80B-WBP1J3KQ70 363 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 UNC5CO95185 931 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 PDHA1P08559 390 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 NPSP0C0P6 89 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 CYP2D6P10635 497 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 ENGP17813 658 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 HDCP19113 662 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 KELP23276 732 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 ITPKBP27987 946 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 KRT17Q04695 432 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 FGL2Q14314 439 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 PARS2Q7L3T8 475 aaKnown RBP5.24□□□□□ -1.57
SMC4-215ENST00000484799 VGLL2Q8N8G2 317 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 C1GALT1C1Q96EU7 318 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 NUP88Q99567 741 aaPredicted RBP5.24□□□□□ -1.57
SMC4-215ENST00000484799 INO80BQ9C086 356 aaPredicted RBP5.24□□□□□ -1.57
SMC4-215ENST00000484799 SEMA4CQ9C0C4 833 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 TFCP2L1Q9NZI6 479 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 FLRT1Q9NZU1 646 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 HESX1Q9UBX0 185 aa5.24□□□□□ -1.57
SMC4-215ENST00000484799 NOP58Q9Y2X3 529 aaKnown RBP5.24□□□□□ -1.57
SMC4-215ENST00000484799 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.24□□□□□ -1.57
SMC4-215ENST00000484799 ANKRD62A6NC57 917 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 ERBB2P04626 1255 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 THP07101 528 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 DLDP09622 509 aaKnown RBP5.23□□□□□ -1.57
SMC4-215ENST00000484799 PF4V1P10720 104 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 CYP2C9P11712 490 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 PLCD1P51178 756 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 NEK2P51955 445 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 PROK1P58294 105 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 LILRA4P59901 499 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 TCF15Q12870 199 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 PRAMEF17Q5VTA0 474 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 RGS7BPQ6MZT1 257 aaPredicted RBP5.23□□□□□ -1.57
SMC4-215ENST00000484799 NAPRTQ6XQN6 538 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 PPP1R32Q7Z5V6 425 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 DPF1Q92782 380 aa5.23□□□□□ -1.57
SMC4-215ENST00000484799 GTPBP4Q9BZE4 634 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms