RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 SCTRP47872 440 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 PXNP49023 591 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-221ENST00000484566 KARSQ15046 597 aaKnown RBP9.31□□□□□ -0.92
DDX39B-221ENST00000484566 PPP2R5AQ15172 486 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 PTPAQ15257 358 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 CALCRLQ16602 461 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 EML3Q32P44 896 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 SH3PXD2AQ5TCZ1 1133 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 ATF7IP2Q5U623 682 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 EEF1DP3Q658K8 133 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 CD300LGQ6UXG3 332 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 APPL2Q8NEU8 664 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 PIGOQ8TEQ8 1089 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 TCEAL3Q969E4 200 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 INSM2Q96T92 566 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-221ENST00000484566 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 CCDC94Q9BW85 323 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-221ENST00000484566 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 GTSE1Q9NYZ3 720 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 PCDHA12Q9UN75 941 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 KIF26AQ9ULI4 1882 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-221ENST00000484566 EML5Q05BV3 1969 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 NUP205Q92621 2012 aa9.31□□□□□ -0.92
DDX39B-221ENST00000484566 SMIM28A0A1B0GU29 152 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 C4orf47A7E2U8 309 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 MEN1O00255 615 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 GIPC1O14908 333 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 CDC45O75419 566 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 CDKL5O76039 1030 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 RHOBTB1O94844 696 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 PRB1P04280 392 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 IGFBP6P24592 240 aaPredicted RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 MCM4P33991 863 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 EPHB3P54753 998 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 EVCP57679 992 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 CREB5Q02930 508 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 SOX4Q06945 474 aaPredicted RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 GRSF1Q12849 480 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 PLK5Q496M5 336 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ARHGAP15Q53QZ3 475 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ARID3BQ8IVW6 561 aaPredicted RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 KCNB2Q92953 911 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ZNF775Q96BV0 537 aaPredicted RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 RSPRY1Q96DX4 576 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ZFYVE19Q96K21 471 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ZC3H10Q96K80 434 aaKnown RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 TMEM209Q96SK2 561 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 BRMS1Q9HCU9 246 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 OBP2AQ9NY56 170 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 TPCN1Q9ULQ1 816 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 USP20Q9Y2K6 914 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 SNX14Q9Y5W7 946 aa9.3□□□□□ -0.92
DDX39B-221ENST00000484566 SPTAN1Q13813 2472 aaKnown RBP9.3□□□□□ -0.92
DDX39B-221ENST00000484566 ASCC3Q8N3C0 2202 aaKnown RBP9.29□□□□□ -0.92
DDX39B-221ENST00000484566 TRAK2O60296 914 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 C1QL1O75973 258 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 FGF19O95750 216 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 CAVIN2O95810 425 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 CAPNS1P04632 268 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 CEACAM1P13688 526 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
DDX39B-221ENST00000484566 HOXC13P31276 330 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 RPL9P32969 192 aaKnown RBP9.29□□□□□ -0.92
DDX39B-221ENST00000484566 HSPA4P34932 840 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 MCM2P49736 904 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 EFNA5P52803 228 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 MRPL58Q14197 206 aaKnown RBP9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ITPRIPL2Q3MIP1 535 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ZNF568Q3ZCX4 644 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ZNF605Q86T29 641 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 PROSER1Q86XN7 944 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 TMC8Q8IU68 726 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 BPIFB1Q8TDL5 484 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 IFT74Q96LB3 600 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ATXN3LQ9H3M9 355 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 TMEM9BQ9NQ34 198 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 THG1LQ9NWX6 298 aaKnown RBP9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ACACAQ13085 2346 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 CACNA1EQ15878 2313 aa9.29□□□□□ -0.92
DDX39B-221ENST00000484566 ARHGEF35A5YM69 484 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 NEMFO60524 1076 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 EDN1P05305 212 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 CSRP1P21291 193 aaKnown RBP9.28□□□□□ -0.92
DDX39B-221ENST00000484566 GBP1P32455 592 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 GPC1P35052 558 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 TXKP42681 527 aa9.28□□□□□ -0.92
DDX39B-221ENST00000484566 CTSOP43234 321 aaPredicted RBP9.28□□□□□ -0.92
DDX39B-221ENST00000484566 ALDH1A3P47895 512 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms