RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ATP2C2O75185 946 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 CASP1P29466 404 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 CTHP32929 405 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 MLLT6P55198 1093 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 VEPH1Q14D04 833 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 SOWAHAQ2M3V2 549 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 ARHGAP15Q53QZ3 475 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 TXNDC8Q6A555 127 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 SHC4Q6S5L8 630 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 CBWD2Q8IUF1 395 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 DCP1BQ8IZD4 617 aaKnown RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 MAB21L3Q8N8X9 362 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 CACTINQ8WUQ7 758 aaKnown RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 ZNF560Q96MR9 790 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 GKN1Q9NS71 199 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 KBTBD4Q9NVX7 518 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 DDX43Q9NXZ2 648 aaKnown RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 FGF19O95750 216 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 LDHAP00338 332 aaKnown RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 KRT19P08727 400 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 WEE1P30291 646 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 PON2Q15165 354 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 FOXD4L6Q3SYB3 417 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 ARHGAP29Q52LW3 1261 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 FOXD4L3Q6VB84 417 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 CCDC65Q8IXS2 484 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 CMTM8Q8IZV2 173 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 GPD1LQ8N335 351 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 BPIFB1Q8TDL5 484 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 USP13Q92995 863 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 DHX58Q96C10 678 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 CHFRQ96EP1 664 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 INTS13Q9NVM9 706 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 GDAP2Q9NXN4 497 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 MAGED2Q9UNF1 606 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 SMG5Q9UPR3 1016 aaKnown RBP19.37■□□□□ 0.69
ATG4B-221ENST00000483778 SNX9Q9Y5X1 595 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 EML5Q05BV3 1969 aa19.37■□□□□ 0.69
ATG4B-221ENST00000483778 GABRDO14764 452 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 HUS1O60921 280 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 TGM1P22735 817 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 LMO2P25791 158 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 CDC25CP30307 473 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 PNPLA4P41247 253 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 RBP5P82980 135 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 SMARCB1Q12824 385 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 SRSF5Q13243 272 aaKnown RBP19.36■□□□□ 0.69
ATG4B-221ENST00000483778 ALCAMQ13740 583 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 TAF12Q16514 161 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 LPAL2Q16609 132 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 INTS6LQ5JSJ4 861 aaKnown RBP19.36■□□□□ 0.69
ATG4B-221ENST00000483778 TRIM68Q6AZZ1 485 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 EPM2AIP1Q7L775 607 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-221ENST00000483778 LRRC52Q8N7C0 313 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 SLC22A12Q96S37 553 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 ACBD6Q9BR61 282 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 TRIM9Q9C026 710 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 C8orf33Q9H7E9 229 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-221ENST00000483778 HPS4Q9NQG7 708 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 OBP2AQ9NY56 170 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 ITGA11Q9UKX5 1188 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 SPTBN2O15020 2390 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 MYOFQ9NZM1 2061 aa19.36■□□□□ 0.69
ATG4B-221ENST00000483778 MYO16Q9Y6X6 1858 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 CHURC1-FNTBB4DL54 471 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 TGFB1I1O43294 461 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 HRO43593 1189 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 TADA3O75528 432 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 CXCL12P48061 93 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 FNTBP49356 437 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 TSPY1Q01534 308 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 PKN3Q6P5Z2 889 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 LIMS2Q7Z4I7 341 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 RALGPS2Q86X27 583 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-221ENST00000483778 RDH13Q8NBN7 331 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 KBTBD7Q8WVZ9 684 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 CYP2S1Q96SQ9 504 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 FAM83CQ9BQN1 747 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 NCDNQ9UBB6 729 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 NME7Q9Y5B8 376 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 SPAG17Q6Q759 2223 aa19.35■□□□□ 0.69
ATG4B-221ENST00000483778 DNAH14Q0VDD8 3507 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 HELZP42694 1942 aaKnown RBP19.34■□□□□ 0.69
ATG4B-221ENST00000483778 K7ESF4 209 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 PPP6R2O75170 966 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 CST3P01034 146 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-221ENST00000483778 ARSAP15289 507 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 NAIF1Q69YI7 327 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-221ENST00000483778 ADGRF2Q8IZF7 708 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 TMEM86AQ8N2M4 240 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 SPEM1Q8N4L4 309 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 CELF5Q8N6W0 485 aaKnown RBP19.34■□□□□ 0.69
ATG4B-221ENST00000483778 ZNF507Q8TCN5 953 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 TNMDQ9H2S6 317 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 EBF3Q9H4W6 596 aa19.34■□□□□ 0.69
ATG4B-221ENST00000483778 FBRSL1Q9HCM7 1045 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms