RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GLRA4Q5JXX5 417 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 CYP4F22Q6NT55 531 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 UNC93AQ86WB7 457 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 MCRS1Q96EZ8 462 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 HERPUD2Q9BSE4 406 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 TRPV2Q9Y5S1 764 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 TRIP12Q14669 1992 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-225ENST00000483495 F8VP50 259 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 KRT3P12035 628 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 GBP1P32455 592 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 CACNB2Q08289 660 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-225ENST00000483495 NOGQ13253 232 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 GDF6Q6KF10 455 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-225ENST00000483495 LIMS2Q7Z4I7 341 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 SERINC5Q86VE9 423 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 RCOR2Q8IZ40 523 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 MRPL45Q9BRJ2 306 aaKnown RBP13.99□□□□□ -0.17
CPNE1-225ENST00000483495 GDAP2Q9NXN4 497 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 USTQ9Y2C2 406 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 CDY2AQ9Y6F7 541 aa13.99□□□□□ -0.17
CPNE1-225ENST00000483495 M0QZ92 97 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 HSF2BPO75031 334 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PFKMP08237 780 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 RALAP11233 206 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PTPN7P35236 360 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 RFC1P35251 1148 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PNPLA4P41247 253 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 CAP1Q01518 475 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 TRIM32Q13049 653 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PKDCCQ504Y2 493 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 POLNQ7Z5Q5 900 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 KLHDC9Q8NEP7 349 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 LRRC45Q96CN5 670 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 RBM41Q96IZ5 413 aaKnown RBP13.98□□□□□ -0.17
CPNE1-225ENST00000483495 APOL6Q9BWW8 343 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 MIS12Q9H081 205 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 DPH5Q9H2P9 285 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 HOMER3Q9NSC5 361 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 ZDHHC18Q9NUE0 388 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 PARP2Q9UGN5 583 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 TSPAN16Q9UKR8 245 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 NME7Q9Y5B8 376 aa13.98□□□□□ -0.17
CPNE1-225ENST00000483495 CST5P28325 142 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 COPS2P61201 443 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 NFX1Q12986 1120 aaKnown RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 CCDC105Q8IYK2 499 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ARRDC4Q8NCT1 418 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ZNF560Q96MR9 790 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ZIM3Q96PE6 472 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 OSBPL8Q9BZF1 889 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 DCLK3Q9C098 648 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 GRHL1Q9NZI5 618 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 KLK14Q9P0G3 267 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 FAN1Q9Y2M0 1017 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 PDCD11Q14690 1871 aaKnown RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 GOLGA8SH3BPF8 625 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 RNF40O75150 1001 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ECEL1O95672 775 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 SETSIPP0DME0 302 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 TCF4P15884 667 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 LRPAP1P30533 357 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 MGAT3Q09327 533 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ACAP1Q15027 740 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ARHGAP17Q68EM7 881 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 TWF2Q6IBS0 349 aaKnown RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ZDHHC24Q6UX98 284 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 SYDE1Q6ZW31 735 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-225ENST00000483495 ANKS1BQ7Z6G8 1248 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 JOSD2Q8TAC2 188 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 WNT8BQ93098 351 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 SLITRK1Q96PX8 696 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 TXLNGYQ9BZA5 131 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 FAM129AQ9BZQ8 928 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 SYNCQ9H7C4 482 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
CPNE1-225ENST00000483495 TRIP11Q15643 1979 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 SCN1AP35498 2009 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 KPNA7A9QM74 516 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 OPA1O60313 960 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 CHRNA1P02708 482 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 PSMA2P25787 234 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 FLT3P36888 993 aa13.96□□□□□ -0.17
CPNE1-225ENST00000483495 CETN2P41208 172 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms