RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 TATDN1Q6P1N9 297 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CXCL17Q6UXB2 119 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ZNF627Q7L945 461 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 TMCO2Q7Z6W1 182 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 LDLRAD3Q86YD5 345 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 HERC6Q8IVU3 1022 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SPICE1Q8N0Z3 855 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 MB21D1Q8N884 522 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 PHOSPHO2Q8TCD6 241 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 GDPD5Q8WTR4 605 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 NEU4Q8WWR8 484 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ASB15Q8WXK1 588 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ATOH1Q92858 354 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CEP89Q96ST8 783 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CDC6Q99741 560 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 OR10A5Q9H207 317 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 COQ6Q9Y2Z9 468 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 FRMPD3Q5JV73 1810 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 DOCK2Q92608 1830 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 GRIN2DO15399 1336 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 FLT1P17948 1338 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 FANCIQ9NVI1 1328 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 A0A0G2JNJ9 132 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 LCHNA4D1U4 455 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 RASGRP1O95267 797 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 CST5P28325 142 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-217ENST00000483442 GTF2F1P35269 517 aaKnown RBP eCLIP4.26□□□□□ -1.73
LRCH3-217ENST00000483442 RPS19P39019 145 aaKnown RBP4.26□□□□□ -1.73
LRCH3-217ENST00000483442 ID4P47928 161 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 PLCD1P51178 756 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 MVPQ14764 893 aaKnown RBP4.26□□□□□ -1.73
LRCH3-217ENST00000483442 GRM7Q14831 915 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 Q6ZPA2 131 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 DPH6Q7L8W6 267 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 ADGRA1Q86SQ6 560 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 AMER2Q8N7J2 671 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 SLC7A14Q8TBB6 771 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 UBXN4Q92575 508 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 TRIM55Q9BYV6 548 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 OR10A2Q9H208 303 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 Q9UFV3 132 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 MUTYHQ9UIF7 546 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 SERPINB13Q9UIV8 391 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 MAGEL2Q9UJ55 1249 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 LRRC37A2A6NM11 1700 aa4.26□□□□□ -1.73
LRCH3-217ENST00000483442 ZFHX2Q9C0A1 2572 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 IL16Q14005 1332 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 PDS5AQ29RF7 1337 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MYH13Q9UKX3 1938 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TMEM221A6NGB7 291 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 M0R296 226 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 VWA5AO00534 786 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 CTAGE5O15320 804 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ZEB2O60315 1214 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 CABYRO75952 493 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 PFKMP08237 780 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SUPT20HL2P0C7V6 817 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 KRT4P19013 534 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 PTPRZ1P23471 2315 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MCM7P33993 719 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SHMT1P34896 483 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MCAMP43121 646 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TNFAIP2Q03169 654 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 RBL2Q08999 1139 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TUBA3CQ13748 450 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SMN1Q16637 294 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MTERF2Q49AM1 385 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ABHD17CQ6PCB6 329 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TUBA3EQ6PEY2 450 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 PCSK4Q6UW60 755 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ASCL5Q7RTU5 278 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ZC3H7AQ8IWR0 971 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SUGP1Q8IWZ8 645 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 CPXCR1Q8N123 301 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MIGA1Q8NAN2 632 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 NEK9Q8TD19 979 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 DLG3Q92796 817 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 GBP4Q96PP9 640 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 PRRX2Q99811 253 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 DHRS4Q9BTZ2 278 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 UPF3AQ9H1J1 476 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 ABHD16BQ9H3Z7 469 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SLC2A4RGQ9NR83 387 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TRMT13Q9NUP7 481 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 FBXO28Q9NVF7 368 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 FBXO10Q9UK96 956 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 FAM50BQ9Y247 325 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 MRPS23Q9Y3D9 190 aaKnown RBP4.25□□□□□ -1.73
LRCH3-217ENST00000483442 SH3BP1Q9Y3L3 701 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 RIPK3Q9Y572 518 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 CFAP54Q96N23 3096 aa4.25□□□□□ -1.73
LRCH3-217ENST00000483442 TRANK1O15050 2925 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 ATAD5Q96QE3 1844 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 FAM221BA6H8Z2 402 aa4.24□□□□□ -1.73
LRCH3-217ENST00000483442 GOLGA6L22H0YM25 854 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms