RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ATRIPQ8WXE1 791 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 RGMAQ96B86 450 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 SH2D3AQ9BRG2 576 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 SIK2Q9H0K1 926 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 WDCPQ9H6R7 721 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 FEZ2Q9UHY8 353 aaPredicted RBP4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZDHHC8Q9ULC8 765 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 PCDHA1Q9Y5I3 950 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 WASHC2CQ9Y4E1 1318 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 TISP43B9A030 160 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 H0YIZ8 118 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 JTBO76095 146 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 NXPH3O95157 252 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 FTLP02792 175 aaPredicted RBP4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 GNAI2P04899 355 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 CYP2D6P10635 497 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 KELP23276 732 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 LIPAP38571 399 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 ALDH9A1P49189 494 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 CLCN2P51788 898 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 MAP2K6P52564 334 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 ETFDHQ16134 617 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 SLC44A4Q53GD3 710 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 CEP78Q5JTW2 689 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 C11orf87Q6NUJ2 197 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 CPA6Q8N4T0 437 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 FANCBQ8NB91 859 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 SLC46A1Q96NT5 459 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 QTRT1Q9BXR0 403 aaKnown RBP4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 TTYH3Q9C0H2 523 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 LMBRD1Q9NUN5 540 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 DLL3Q9NYJ7 618 aa4.03□□□□□ -1.76
LAPTM4A-202ENST00000483117 DCLK1O15075 740 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 TYRP14679 529 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 CYP2C18P33260 490 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 EXOSC9Q06265 439 aaKnown RBP4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 TREML2Q5T2D2 321 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 THEMIS2Q5TEJ8 643 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 PRAMEF17Q5VTA0 474 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 FAM160B1Q5W0V3 765 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 USP45Q70EL2 814 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC29A4Q7RTT9 530 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 PRR18Q8N4B5 295 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 C9orf106Q8NAJ2 232 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 PCSK9Q8NBP7 692 aaKnown RBP4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 TBC1D5Q92609 795 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 ASPSCR1Q9BZE9 553 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 HESX1Q9UBX0 185 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 SERTAD3Q9UJW9 196 aa4.02□□□□□ -1.77
LAPTM4A-202ENST00000483117 ALG1L2C9J202 215 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 QSOX1O00391 747 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC16A6O15403 523 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC16A3O15427 465 aaKnown RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 DTNBO60941 627 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 DNAJB5O75953 348 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 IL6RP08887 468 aaPredicted RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 PIM1P11309 404 aaPredicted RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 ENGP17813 658 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 HDCP19113 662 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 RECQLP46063 649 aaPredicted RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 EEFSECP57772 596 aaKnown RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 TUBA4AP68366 448 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 SUPT20HL1Q3ZLR7 823 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 AARS2Q5JTZ9 985 aaKnown RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 TEDDM1Q5T9Z0 273 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 ICE2Q659A1 982 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 ANKRD16Q6P6B7 361 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 NAPRTQ6XQN6 538 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 CATIPQ7Z7H3 387 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 NEK8Q86SG6 692 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 DDX17Q92841 729 aaKnown RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 NELL2Q99435 816 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 MACROD1Q9BQ69 325 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 SEMA4CQ9C0C4 833 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 NRIP3Q9NQ35 241 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 PNPOQ9NVS9 261 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 SSX2IPQ9Y2D8 614 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 BTBD3Q9Y2F9 522 aa4.01□□□□□ -1.77
LAPTM4A-202ENST00000483117 PROB1E7EW31 1015 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 PPP6CO00743 305 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 TLR5O60602 858 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 FESP07332 822 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 POU2F2P09086 479 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 CERS1P27544 350 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 LILRA4P59901 499 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 CYP4F2P78329 520 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 LONRF3Q496Y0 759 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 PCID2Q5JVF3 399 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 ARHGAP40Q5TG30 622 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 SFRP4Q6FHJ7 346 aaPredicted RBP4□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC18B1Q6NT16 456 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC2A7Q6PXP3 512 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 ATG4AQ8WYN0 398 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 ZBTB9Q96C00 473 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms