RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 RAP1GAPP47736 663 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 CDR1P51861 262 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 PSMC1P62191 440 aaKnown RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 STX1AQ16623 288 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 CAVIN1Q6NZI2 390 aaKnown RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 C4orf50Q6ZRC1 276 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 SPATA2LQ8IUW3 424 aaPredicted RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 FAM114A1Q8IWE2 563 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 ACSF2Q96CM8 615 aaPredicted RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 CNOT6LQ96LI5 555 aaKnown RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 DNMT3BQ9UBC3 853 aaKnown RBP22.33■■□□□ 1.17
SEC13-217ENST00000482647 TCF20Q9UGU0 1960 aaKnown RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 MTCL1Q9Y4B5 1905 aaKnown RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 P4HA2O15460 535 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 LRRN2O75325 713 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 AFPP02771 609 aaKnown RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 HAPLN1P10915 354 aaPredicted RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 PTPN1P18031 435 aaKnown RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 FSHRP23945 695 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 KCNH2Q12809 1159 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 KLHL40Q2TBA0 621 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 PABPC1LQ4VXU2 614 aaKnown RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 TTC9BQ8N6N2 239 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 MYCBPAPQ8TBZ2 947 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 FUBP3Q96I24 572 aaKnown RBP eCLIP22.32■■□□□ 1.16
SEC13-217ENST00000482647 TNIP3Q96KP6 325 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 BCO2Q9BYV7 579 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 SDCBP2Q9H190 292 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 CRTAC1Q9NQ79 661 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 HCFC1R1Q9NWW0 138 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.32■■□□□ 1.16
SEC13-217ENST00000482647 CEP72Q9P209 647 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 MAGEC2Q9UBF1 373 aaPredicted RBP22.32■■□□□ 1.16
SEC13-217ENST00000482647 ASB3Q9Y575 518 aa22.32■■□□□ 1.16
SEC13-217ENST00000482647 SP100P23497 879 aaPredicted RBP22.31■■□□□ 1.16
SEC13-217ENST00000482647 NTHL1P78549 312 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 CFAP221Q4G0U5 840 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 UNC93AQ86WB7 457 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 IRF2BP1Q8IU81 584 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 PLCD3Q8N3E9 789 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 TTC39CQ8N584 583 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 TDRD5Q8NAT2 981 aaKnown RBP22.31■■□□□ 1.16
SEC13-217ENST00000482647 FAM200AQ8TCP9 573 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 CORO1BQ9BR76 489 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 DPEP3Q9H4B8 488 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 CD320Q9NPF0 282 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 AVENQ9NQS1 362 aaPredicted RBP22.31■■□□□ 1.16
SEC13-217ENST00000482647 NME7Q9Y5B8 376 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 TSC2P49815 1807 aa22.31■■□□□ 1.16
SEC13-217ENST00000482647 BDP1A6H8Y1 2624 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 SOAT2O75908 522 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 RHOP08100 348 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 TRIM21P19474 475 aaKnown RBP22.3■■□□□ 1.16
SEC13-217ENST00000482647 CYP2F1P24903 491 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 CYP27A1Q02318 531 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 VEPH1Q14D04 833 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 MDH1BQ5I0G3 518 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 CYP4A22Q5TCH4 519 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 ITIH5Q86UX2 942 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 LEMD2Q8NC56 503 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 B3GALNT2Q8NCR0 500 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 ENOX1Q8TC92 643 aaKnown RBP22.3■■□□□ 1.16
SEC13-217ENST00000482647 MYLPFQ96A32 169 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 DNAI2Q9GZS0 605 aa22.3■■□□□ 1.16
SEC13-217ENST00000482647 MUC3AQ02505 3323 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 C2CD4DB7Z1M9 353 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 TNFRSF10AO00220 468 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 DLL1O00548 723 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 LETM1O95202 739 aaPredicted RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 GBP2P32456 591 aaPredicted RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 MTIF2P46199 727 aaKnown RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 NDST1P52848 882 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 RPL10AP62906 217 aaKnown RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 INCA1Q0VD86 236 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 CCDC142Q17RM4 750 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 PDZD4Q76G19 769 aaPredicted RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 GET4Q7L5D6 327 aaPredicted RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 DNAJB7Q7Z6W7 309 aaPredicted RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 ZDHHC14Q8IZN3 488 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 TATDN2Q93075 761 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 PCED1BQ96HM7 432 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 ASAH2Q9NR71 780 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 MRPS23Q9Y3D9 190 aaKnown RBP22.29■■□□□ 1.16
SEC13-217ENST00000482647 NCOR1O75376 2440 aa22.29■■□□□ 1.16
SEC13-217ENST00000482647 ZNF197O14709 1029 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 CD58P19256 250 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 MAGEA11P43364 429 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 TYRO3Q06418 890 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 TAF12Q16514 161 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 VSTM1Q6UX27 236 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 CRYBG2Q8N1P7 616 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 PSMG2Q969U7 264 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 DNAJC25Q9H1X3 360 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 FAM124BQ9H5Z6 455 aaPredicted RBP22.28■■□□□ 1.16
SEC13-217ENST00000482647 NFE2L3Q9Y4A8 694 aa22.28■■□□□ 1.16
SEC13-217ENST00000482647 ZFP37Q9Y6Q3 630 aaPredicted RBP22.28■■□□□ 1.16
SEC13-217ENST00000482647 MICAL2O94851 1124 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 ATF6P18850 670 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 SKOR2Q2VWA4 1001 aaPredicted RBP22.27■■□□□ 1.16
SEC13-217ENST00000482647 ACOT1Q86TX2 421 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms