RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 NKIRAS1Q9NYS0 192 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 ZNF148Q9UQR1 794 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 EXOC1LA0A1B0GW35 172 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 H0YCG3 227 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 K7ERI5 159 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 DKC1O60832 514 aaKnown RBP eCLIP15.69■□□□□ 0.1
ATG4B-220ENST00000482507 AOC2O75106 756 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 BANF1O75531 89 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 ASMTLO95671 621 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 ARL2P36404 184 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 TNFSF9P41273 254 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 PKN2Q16513 984 aaKnown RBP15.69■□□□□ 0.1
ATG4B-220ENST00000482507 ASRGL1Q7L266 308 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 RCOR2Q8IZ40 523 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 DENND1AQ8TEH3 1009 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 AGAP11Q8TF27 550 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 STAMBPL1Q96FJ0 436 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 MCEEQ96PE7 176 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 CXorf56Q9H5V9 222 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 IP6K2Q9UHH9 426 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 LOC285556D6RIA3 1793 aa15.69■□□□□ 0.1
ATG4B-220ENST00000482507 FAM47DPA6NHR8 397 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 BRD2P25440 801 aaKnown RBP15.68■□□□□ 0.1
ATG4B-220ENST00000482507 SLC8A1P32418 973 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 GAD2Q05329 585 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 GPS1Q13098 491 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 SPOCD1Q6ZMY3 1216 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 DEPTORQ8TB45 409 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 PAIP2Q9BPZ3 127 aaKnown RBP15.68■□□□□ 0.1
ATG4B-220ENST00000482507 ARHGEF3Q9NR81 526 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 MANSC4A6NHS7 340 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-220ENST00000482507 POC1B-GALNT4F8VUJ3 575 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 ALADP13716 330 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 OASLQ15646 514 aaKnown RBP15.68■□□□□ 0.1
ATG4B-220ENST00000482507 ZNF394Q53GI3 561 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 ZFYVE27Q5T4F4 411 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 TLDC1Q6P9B6 456 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 WDTC1Q8N5D0 677 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 KLHL29Q96CT2 875 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 CCDC77Q9BR77 488 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 C10orf88Q9H8K7 445 aa15.68■□□□□ 0.1
ATG4B-220ENST00000482507 MAFBQ9Y5Q3 323 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-220ENST00000482507 SIP14410 1827 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 hCG_1818297A0A087WSY0 165 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 OATP04181 439 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 TBXAS1P24557 533 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 NAMPTP43490 491 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 RNASEH2BQ5TBB1 312 aaKnown RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 RNF43Q68DV7 783 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 DRICH1Q6PGQ1 229 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 C4orf33Q8N1A6 199 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 MRRFQ96E11 262 aaKnown RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 TMEM121Q9BTD3 319 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 SLCO1B3Q9NPD5 702 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 DNAJC3Q13217 504 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 PPP1R15BQ5SWA1 713 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 CYP4A22Q5TCH4 519 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 PPP1R21Q6ZMI0 780 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 GBP7Q8N8V2 638 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 TFAP2BQ92481 460 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 CFAP57Q96MR6 1250 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 PARK7Q99497 189 aaKnown RBP15.67■□□□□ 0.1
ATG4B-220ENST00000482507 PITPNM3Q9BZ71 974 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 ZNF302Q9NR11 478 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 TRPM7Q96QT4 1865 aa15.67■□□□□ 0.1
ATG4B-220ENST00000482507 A0A1W2PPM1 405 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 SOWAHBA6NEL2 793 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 FAM189A1O60320 539 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 PIAS1O75925 651 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 TJP3O95049 919 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 FGFR1P11362 822 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 EZRP15311 586 aaKnown RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 CDKN2BP42772 138 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 MYL6P60660 151 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 CAPSQ13938 189 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 SLFN12LQ6IEE8 588 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 KCNN1Q92952 543 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 FOXP3Q9BZS1 431 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 TRABDQ9H4I3 376 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 MYH9P35579 1960 aaKnown RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 LCTP09848 1927 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 BRCA2P51587 3418 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 GOLGA8SH3BPF8 625 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 ATG7O95352 703 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 SLC25A27O95847 323 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 ASS1P00966 412 aaKnown RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 ELF1P32519 619 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 RPA3P35244 121 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-220ENST00000482507 IL9RQ01113 521 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 SLC1A5Q15758 541 aa15.66■□□□□ 0.1
ATG4B-220ENST00000482507 DNAJC24Q6P3W2 148 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms