RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 MID2Q9UJV3 735 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 A0A0B4J269 797 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 NNMTP40261 264 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 CLCN6P51797 869 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 COPS2P61201 443 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 KIAA0319LQ8IZA0 1049 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 PPP4R1Q8TF05 950 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 ZNF512Q96ME7 567 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCM2-214ENST00000481194 POC1B-GALNT4F8VUJ3 575 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 NDST1P52848 882 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 YWHAHQ04917 246 aaPredicted RBP20.22■□□□□ 0.83
CCM2-214ENST00000481194 OVOS1Q6IE37 1185 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 KRT82Q9NSB4 513 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 ABI2Q9NYB9 513 aaPredicted RBP20.22■□□□□ 0.83
CCM2-214ENST00000481194 ADCY6O43306 1168 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 TROVE2P10155 538 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCM2-214ENST00000481194 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 DCAF6Q58WW2 860 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 CYP4A22Q5TCH4 519 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 LRRC52Q8N7C0 313 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 ATP6V0D2Q8N8Y2 350 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 FSD1LQ9BXM9 530 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 GANQ9H2C0 597 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 RNPEPQ9H4A4 650 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 EXOC1LA0A1B0GW35 172 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 TBKBP1A7MCY6 615 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 RASGRF2O14827 1237 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 PJA2O43164 708 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 BUB1BO60566 1050 aaPredicted RBP20.22■□□□□ 0.83
CCM2-214ENST00000481194 SLC10A3P09131 477 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 SPIRE1Q08AE8 756 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 AP1B1Q10567 949 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 GEN1Q17RS7 908 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 ARHGAP15Q53QZ3 475 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 KCND1Q9NSA2 647 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 SAYSD1Q9NPB0 183 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 RSPH14Q9UHP6 348 aa20.22■□□□□ 0.83
CCM2-214ENST00000481194 CASTOR2A6NHX0 329 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 EFCAB14O75071 495 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 TADA3O75528 432 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 CSPG5O95196 566 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 KPNA1P52294 538 aaPredicted RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 CASP8Q14790 479 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 PDK1Q15118 436 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 ZACNQ401N2 412 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 KRT35Q92764 455 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 APBB2Q92870 758 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 CNPY3Q9BT09 278 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 TISP43B9A030 160 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 PIK3R2O00459 728 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 ATMINO43313 823 aaPredicted RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 PROSCO94903 275 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 LRG1P02750 347 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 CALRP27797 417 aaKnown RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 NNTQ13423 1086 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 P3H1Q32P28 736 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 MCOLN2Q8IZK6 566 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 SLC20A1Q8WUM9 679 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 IFT43Q96FT9 208 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 PLCD4Q9BRC7 762 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 NTPCRQ9BSD7 190 aaKnown RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 SIK2Q9H0K1 926 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 FAM117BQ6P1L5 589 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 ANKRD42Q8N9B4 389 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 SMARCD1Q96GM5 515 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 SENP6Q9GZR1 1112 aaPredicted RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 GPS1Q13098 491 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 MDH1BQ5I0G3 518 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 C1orf228Q6PIY5 440 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 MMGT1Q8N4V1 131 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 TMEM199Q8N511 208 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 EXOC4Q96A65 974 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 ARHGEF26Q96DR7 871 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 IRX2Q9BZI1 471 aaPredicted RBP20.21■□□□□ 0.83
CCM2-214ENST00000481194 ELOVL4Q9GZR5 314 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 RREB1Q92766 1687 aa20.21■□□□□ 0.83
CCM2-214ENST00000481194 HMGB1P1B2RPK0 211 aaPredicted RBP20.2■□□□□ 0.82
CCM2-214ENST00000481194 B4GALT4O60513 344 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 NCAM1P13591 858 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 DEPDC1BQ8WUY9 529 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 PCDHB5Q9Y5E4 795 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 DHX15O43143 795 aaKnown RBP20.2■□□□□ 0.82
CCM2-214ENST00000481194 AMHR2Q16671 573 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 C1orf54Q8WWF1 131 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 CFAP36Q96G28 342 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 CES2O00748 559 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 FNTAP49354 379 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 IL9RQ01113 521 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 CREMQ03060 361 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 ARHGAP1Q07960 439 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 IRF5Q13568 498 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 NUDT18Q6ZVK8 323 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 ST3GAL5Q9UNP4 418 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 ITIH2P19823 946 aa20.2■□□□□ 0.82
CCM2-214ENST00000481194 DLG4P78352 724 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms