RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 AHRRA9YTQ3 701 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 ZFPL1O95159 310 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 A1BGP04217 495 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 TYRP1P17643 537 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 IL1R2P27930 398 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 HIBADHP31937 336 aaKnown RBP6.24□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF134P52741 427 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 WNT3P56703 355 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 HSD11B2P80365 405 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 RRP1BQ14684 758 aaKnown RBP6.24□□□□□ -1.41
UPF3A-207ENST00000481131 NFIXQ14938 502 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 GAS2L3Q86XJ1 694 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 VGLL2Q8N8G2 317 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 FANCBQ8NB91 859 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 EDAQ92838 391 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 FAM89AQ96GI7 184 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 STK33Q9BYT3 514 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 RNPEPQ9H4A4 650 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF212Q9UDV6 495 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 MAN2B2Q9Y2E5 1009 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
UPF3A-207ENST00000481131 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 CCDC195A0A1B0GUA6 201 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 AREL1O15033 823 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 RASSF9O75901 435 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 SUN1O94901 812 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 NDST3O95803 873 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 HALP42357 657 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 FAM189BP81408 668 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 PIGFQ07326 219 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF844Q08AG5 666 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 NPY5RQ15761 445 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 ZIK1Q3SY52 487 aaPredicted RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 C4orf46Q504U0 113 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 PLA1AQ53H76 456 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 FCRL6Q6DN72 434 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 BEND5Q7L4P6 421 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF280BQ86YH2 543 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 NKAPQ8N5F7 415 aaKnown RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF566Q969W8 418 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 REXO4Q9GZR2 422 aaKnown RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 EIF2B4Q9UI10 523 aaKnown RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 SORCS3Q9UPU3 1222 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 ATP11BQ9Y2G3 1177 aa6.23□□□□□ -1.41
UPF3A-207ENST00000481131 TARBP1Q13395 1621 aaKnown RBP6.23□□□□□ -1.41
UPF3A-207ENST00000481131 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 FGD5Q6ZNL6 1462 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 TOP2BQ02880 1626 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 CYP27B1O15528 508 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 ACVR2AP27037 513 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 GABRB3P28472 473 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 PDIA3P30101 505 aaKnown RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 CHKAP35790 457 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 ALDH9A1P49189 494 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 LILRA4P59901 499 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 GALNT1Q10472 559 aaPredicted RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 STARD3Q14849 445 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 IQCB1Q15051 598 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 PUM3Q15397 648 aaKnown RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 B3GNTL1Q67FW5 361 aaPredicted RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 GDF7Q7Z4P5 450 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 SDR16C5Q8N3Y7 309 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 DCLRE1CQ96SD1 692 aaKnown RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 HEPHQ9BQS7 1158 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 ZNF768Q9H5H4 540 aaKnown RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 XPNPEP3Q9NQH7 507 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 ST6GALNAC2Q9UJ37 374 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 SLC39A10Q9ULF5 831 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 CEP83Q9Y592 693 aa6.22□□□□□ -1.41
UPF3A-207ENST00000481131 MORC2Q9Y6X9 1032 aaPredicted RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 EIF4G3O43432 1585 aaKnown RBP6.22□□□□□ -1.41
UPF3A-207ENST00000481131 FAM234BA2RU67 622 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 MARCH11A6NNE9 402 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 DIRC3C9JPN6 131 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 H7C4K7 107 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 RAB27BO00194 218 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 TRIM24O15164 1050 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 RPS6KA4O75676 772 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 GPANK1O95872 356 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 SPATA31D3P0C874 917 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 CYP2C9P11712 490 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 MYL4P12829 197 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 KCNA2P16389 499 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-207ENST00000481131 CNGB1Q14028 1251 aaPredicted RBP6.21□□□□□ -1.42
UPF3A-207ENST00000481131 ZRSR2Q15696 482 aaKnown RBP6.21□□□□□ -1.42
UPF3A-207ENST00000481131 GGT6Q6P531 493 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 SPATA31D4Q6ZUB0 917 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 KCTD20Q7Z5Y7 419 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 MAPKAPK5Q8IW41 473 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 ANKRD42Q8N9B4 389 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 ZNF527Q8NB42 609 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms