RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 ALDH1A3P47895 512 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 TUFMP49411 452 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 CDR1P51861 262 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 TWF1Q12792 350 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 PLD1Q13393 1074 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 FAM171BQ6P995 826 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 SPATA2LQ8IUW3 424 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 ELMOD1Q8N336 334 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 B3GALNT2Q8NCR0 500 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 TATDN2Q93075 761 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 NT5C1BQ96P26 610 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 PKMYT1Q99640 499 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 DNAI2Q9GZS0 605 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 CRISPLD1Q9H336 500 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 ABCB6Q9NP58 842 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 CRTAC1Q9NQ79 661 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 CDH22Q9UJ99 828 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 NME7Q9Y5B8 376 aa16.64■□□□□ 0.25
CNKSR1-206ENST00000481077 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 TPM2P07951 284 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 PTPN1P18031 435 aaKnown RBP16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 CD58P19256 250 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 ZNF165P49910 485 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 NDST1P52848 882 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 CYP27A1Q02318 531 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 LRMPQ12912 555 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 MGAT5BQ3V5L5 792 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 VWA3BQ502W6 1294 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 CDKAL1Q5VV42 579 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 UNC93AQ86WB7 457 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 SEPT5Q99719 369 aaPredicted RBP16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 POMKQ9H5K3 350 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
CNKSR1-206ENST00000481077 GTPBP10A4D1E9 387 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 SMTNL1A8MU46 457 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 EPHB3P54753 998 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 YWHAEP62258 255 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 CUL2Q13617 745 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 CCDC142Q17RM4 750 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 CFAP221Q4G0U5 840 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 IQCEQ6IPM2 695 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 GRASPQ7Z6J2 395 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 TTC9BQ8N6N2 239 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 MYLPFQ96A32 169 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 PCED1BQ96HM7 432 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 ZNF512Q96ME7 567 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 NT5C1AQ9BXI3 368 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 INTS2Q9H0H0 1204 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 NDST4Q9H3R1 872 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 PRKAG3Q9UGI9 489 aa16.62■□□□□ 0.25
CNKSR1-206ENST00000481077 SOAT2O75908 522 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 HAPLN1P10915 354 aaPredicted RBP16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 PTPN2P17706 415 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 NCAPHQ15003 741 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 MIIPQ5JXC2 388 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 PPM1KQ8N3J5 372 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 ARID3AQ99856 593 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 PHF7Q9BWX1 381 aaPredicted RBP16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 HMGXB4Q9UGU5 601 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 CLUHO75153 1309 aa16.61■□□□□ 0.25
CNKSR1-206ENST00000481077 BECN2A8MW95 431 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 CILPO75339 1184 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 CAVIN2O95810 425 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 BDNFP23560 247 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 CYP2F1P24903 491 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 RPL10AP62906 217 aaKnown RBP16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 ORC1Q13415 861 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 VEPH1Q14D04 833 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 KRT31Q15323 416 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 PABPC1LQ4VXU2 614 aaKnown RBP16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 ITIH5Q86UX2 942 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 ADHFE1Q8IWW8 467 aa16.6■□□□□ 0.25
CNKSR1-206ENST00000481077 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms