RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 VNN1O95497 513 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 GNA14O95837 355 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
VCP-206ENST00000480327 FGFR3P22607 806 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 TKTP29401 623 aaKnown RBP9.72□□□□□ -0.85
VCP-206ENST00000480327 PIK3CAP42336 1068 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 MTIF2P46199 727 aaKnown RBP9.72□□□□□ -0.85
VCP-206ENST00000480327 TAF6P49848 677 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 ZNF165P49910 485 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 LILRA4P59901 499 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 MYL6P60660 151 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 CLDN10P78369 228 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 RBP5P82980 135 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 MYL5Q02045 173 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 CREMQ03060 361 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 FZD5Q13467 585 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 RAB33AQ14088 237 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 SLC5A9Q2M3M2 681 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 ELMSAN1Q6PJG2 1045 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 USP37Q86T82 979 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 NPAS3Q8IXF0 933 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 CXorf38Q8TB03 319 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 SLC7A14Q8TBB6 771 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 ENOX1Q8TC92 643 aaKnown RBP9.72□□□□□ -0.85
VCP-206ENST00000480327 SLC35C1Q96A29 364 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 HPDLQ96IR7 371 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 KXD1Q9BQD3 176 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 THAP9Q9H5L6 903 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 MAGEC2Q9UBF1 373 aaPredicted RBP9.72□□□□□ -0.85
VCP-206ENST00000480327 TSC2P49815 1807 aa9.72□□□□□ -0.85
VCP-206ENST00000480327 F5P12259 2224 aa9.71□□□□□ -0.85
VCP-206ENST00000480327 KPNA7A9QM74 516 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 KCNJ18B7U540 433 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 CYB561D2O14569 222 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 IKBKBO14920 756 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 TRAPPC3O43617 180 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 STX10O60499 249 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 HLA-DRAP01903 254 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 POU2F2P09086 479 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 CD72P21854 359 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 HOXA9P31269 272 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 OR1D2P34982 312 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 MXI1P50539 228 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 AP3M2P53677 418 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 NCOA4Q13772 614 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 KCNJ12Q14500 433 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 NCAPHQ15003 741 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 ZACNQ401N2 412 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 SV2CQ496J9 727 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 CBWD6Q4V339 395 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 CBWD3Q5JTY5 395 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 CBWD5Q5RIA9 395 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 KRT39Q6A163 491 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 SPOPLQ6IQ16 392 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 TRIM59Q8IWR1 403 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 DHX40Q8IX18 779 aaKnown RBP9.71□□□□□ -0.86
VCP-206ENST00000480327 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 TAS1R2Q8TE23 839 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 SUSD3Q96L08 255 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 SENP8Q96LD8 212 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 ZNF560Q96MR9 790 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 PI4K2AQ9BTU6 479 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 SEMA4AQ9H3S1 761 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 MTRRQ9UBK8 725 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
VCP-206ENST00000480327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.86
VCP-206ENST00000480327 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
VCP-206ENST00000480327 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 ZFP37Q9Y6Q3 630 aaPredicted RBP9.71□□□□□ -0.86
VCP-206ENST00000480327 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 RALGAPA1Q6GYQ0 2036 aa9.71□□□□□ -0.86
VCP-206ENST00000480327 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 KANSL1LA0AUZ9 987 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 SMTNL1A8MU46 457 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 BECN2A8MW95 431 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 PES1O00541 588 aaKnown RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 PRKCSHP14314 528 aaPredicted RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 FCARP24071 287 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 GTF2H1P32780 548 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 PNPLA4P41247 253 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 FMO5P49326 533 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 CDR1P51861 262 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 MYL7Q01449 175 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 LRMPQ12912 555 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 ELAVL2Q12926 359 aaKnown RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 MLF2Q15773 248 aaPredicted RBP9.7□□□□□ -0.86
VCP-206ENST00000480327 ZNF699Q32M78 642 aa9.7□□□□□ -0.86
VCP-206ENST00000480327 WDR72Q3MJ13 1102 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms