RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PCDHGA5Q9Y5G8 931 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CLIC4Q9Y696 253 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CACNA1GO43497 2377 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 RALGAPA1Q6GYQ0 2036 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 A0A0B4J269 797 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TTC26A0AVF1 554 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 SOAT2O75908 522 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 AKAP3O75969 853 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PRAMEF12O95522 483 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 LDHAP00338 332 aaKnown RBP7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TNNC2P02585 160 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 CCDC192P0DO97 292 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TYMPP19971 482 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 GABRR2P28476 465 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 WEE1P30291 646 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 LRPAP1P30533 357 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 AVPR1AP37288 418 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 MPLP40238 635 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PNPLA4P41247 253 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 AARSP49588 968 aaKnown RBP eCLIP7.63□□□□□ -1.19
COL17A1-205ENST00000480127 LILRA4P59901 499 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ASIC1P78348 528 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 AMPD3Q01432 767 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 GPR17Q13304 367 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ALCAMQ13740 583 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PTPAQ15257 358 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PLK5Q496M5 336 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TCEAL6Q6IPX3 200 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 FSTL4Q6MZW2 842 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 UNQ6494/PRO21346Q6UXR6 183 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TTC9BQ8N6N2 239 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 KDF1Q8NAX2 398 aaPredicted RBP7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ATAD1Q8NBU5 361 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 BPIFB1Q8TDL5 484 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TCEAL3Q969E4 200 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PSMG2Q969U7 264 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 EXOC4Q96A65 974 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 HVCN1Q96D96 273 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 SAAL1Q96ER3 474 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ANKRD36BP1Q96IX9 119 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 CLIC6Q96NY7 704 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM209Q96SK2 561 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ZSCAN16Q9H4T2 348 aaPredicted RBP7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ASB7Q9H672 318 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 IL21Q9HBE4 155 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 VPS45Q9NRW7 570 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 PANK4Q9NVE7 773 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 RBAKQ9NYW8 714 aaPredicted RBP7.63□□□□□ -1.19
COL17A1-205ENST00000480127 DERAQ9Y315 318 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 ASB3Q9Y575 518 aa7.63□□□□□ -1.19
COL17A1-205ENST00000480127 CNOT1A5YKK6 2376 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 BAHCC1Q9P281 2608 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 MTMR11A4FU01 709 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GOLGA8IPA6NC78 632 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 OTOL1A6NHN0 477 aaPredicted RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GOLGA8JA6NMD2 632 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 TRDMT1O14717 391 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GIPC1O14908 333 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 STX6O43752 255 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 PRPF40AO75400 957 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 PRPF6O94906 941 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SYT1P21579 422 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CDC25CP30307 473 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 POLR2BP30876 1174 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 ME1P48163 572 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 NOVA1P51513 510 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CYP4F8P98187 520 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GTF2BQ00403 316 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 PLCB2Q00722 1185 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 MYL7Q01449 175 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GRIN1Q05586 938 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 MYBPC2Q14324 1141 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 ZBTB6Q15916 424 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 ITPRIPL2Q3MIP1 535 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SPATA1Q5VX52 437 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 C9orf57Q5W0N0 161 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 RNF43Q68DV7 783 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SPATA2LQ8IUW3 424 aaPredicted RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SCN4BQ8IWT1 228 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CAMKK1Q8N5S9 505 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CSGALNACT2Q8N6G5 542 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GIPC2Q8TF65 315 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 MRPS31Q92665 395 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 FNBP1Q96RU3 617 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 MMS19Q96T76 1030 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 FAM83CQ9BQN1 747 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SLC46A2Q9BY10 475 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CCSER1Q9C0I3 900 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SMG9Q9H0W8 520 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 DUSP15Q9H1R2 295 aaPredicted RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 PCIF1Q9H4Z3 704 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 TASP1Q9H6P5 420 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 FBRSL1Q9HCM7 1045 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 TRPC7Q9HCX4 862 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 HPS4Q9NQG7 708 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 GKN1Q9NS71 199 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 AGAP1Q9UPQ3 857 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms