RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PP2D1A8MPX8 630 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 KIAA1324LA8MWY0 1029 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 E9PMD0 336 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ENC1O14682 589 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 EIF3DO15371 548 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ITGB1P05556 798 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 PRKCBP05771 671 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 HSP90AA1P07900 732 aaKnown RBP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 GALTP07902 379 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CTSAP10619 480 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ITGA4P13612 1032 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 PLCG1P19174 1290 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 NME2P22392 152 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CMA1P23946 247 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 SSTR4P31391 388 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 RPL9P32969 192 aaKnown RBP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CTNNB1P35222 781 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 GRIK1P39086 918 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ASPAP45381 313 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 KRT85P78386 507 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 STRN3Q13033 797 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 COASYQ13057 564 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TUSC3Q13454 348 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 MAP7Q14244 749 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 POSTNQ15063 836 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 NAB2Q15742 525 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ZBTB6Q15916 424 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CPSF6Q16630 551 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 NT5DC1Q5TFE4 455 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 RRAGBQ5VZM2 374 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 RESP18Q5W5W9 173 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 MPZL3Q6UWV2 235 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 LRRC55Q6ZSA7 311 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 STXBP4Q6ZWJ1 553 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ZNF720Q7Z2F6 126 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 COLGALT2Q8IYK4 626 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 FBXL6Q8N531 539 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 COLGALT1Q8NBJ5 622 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CMASQ8NFW8 434 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 GIMAP7Q8NHV1 300 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 SPATA18Q8TC71 538 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 DNAJC19Q96DA6 116 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM169Q96HH4 297 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 MSLNLQ96KJ4 702 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ASB2Q96Q27 587 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 REEP2Q9BRK0 252 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TRIM6Q9C030 488 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-213ENST00000480102 PDZD7Q9H5P4 517 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 ASB7Q9H672 318 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TMEM206Q9H813 350 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 GPRC5CQ9NQ84 441 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 KMT5AQ9NQR1 393 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 PCMTD2Q9NV79 361 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 CRIM1Q9NZV1 1036 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 FNIP2Q9P278 1114 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 HPSEQ9Y251 543 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 C2CD2Q9Y426 696 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 TTC3P53804 2025 aa5.35□□□□□ -1.55
PTCD3-213ENST00000480102 A0A0B4J269 797 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ARHGEF37A1IGU5 675 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 CLDN3O15551 220 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 XPOTO43592 962 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 TRAPPC3O43617 180 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FAM189A1O60320 539 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 TBCAO75347 108 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 PRPF40AO75400 957 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FBXO24O75426 580 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 LDHAP00338 332 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SOD2P04179 222 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 F13BP05160 661 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 THP07101 528 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 NFICP08651 508 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 CLTAP09496 248 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FAM163BP0C2L3 166 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 USP17L7P0C7H9 530 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SLFN14P0C7P3 912 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SRGAP2BP0DMP2 458 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FGFR1P11362 822 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 GARTP22102 1010 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ARNTP27540 789 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 HOXA9P31269 272 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 AARSP49588 968 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 PEX3P56589 373 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 BCAR1P56945 870 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 DSG1Q02413 1049 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ID3Q02535 119 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ITIH3Q06033 890 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ZNF252P-AS1Q0IIN9 211 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ADAM15Q13444 863 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SMC1AQ14683 1233 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 KARSQ15046 597 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 STK38Q15208 465 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 DUSP6Q16828 381 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 BMT2Q1RMZ1 405 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 COBLL1Q53SF7 1204 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 C15orf39Q6ZRI6 1047 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 CLEC17AQ6ZS10 378 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 HAUS6Q7Z4H7 955 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms