RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 WRNIP1Q96S55 665 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 RBM15Q96T37 977 aaKnown RBP eCLIP7□□□□□ -1.29
PBRM1-220ENST00000480064 PABPC3Q9H361 631 aaKnown RBP7□□□□□ -1.29
PBRM1-220ENST00000480064 RLIMQ9NVW2 624 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 HAUS2Q9NVX0 235 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 ZSCAN32Q9NX65 697 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 Q9UFV3 132 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 RAPGEFL1Q9UHV5 662 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 TBX20Q9UMR3 447 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 RRP7AQ9Y3A4 280 aaKnown RBP7□□□□□ -1.29
PBRM1-220ENST00000480064 ACTL7AQ9Y615 435 aa7□□□□□ -1.29
PBRM1-220ENST00000480064 A0A087WWL8 130 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 MYOCOSA0A1B0GUC4 107 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 TMEM233B4DJY2 109 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 AHCYL1O43865 530 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 PEX10O60683 326 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 ALDH1A2O94788 518 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 STARD3NLO95772 234 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 POLD2P49005 469 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 DLG4P78352 724 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 NSUN2Q08J23 767 aaKnown RBP eCLIP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 SCAPQ12770 1279 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 ANKRD1Q15327 319 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 ACAD10Q6JQN1 1059 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 USP49Q70CQ1 688 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 B4GALNT4Q76KP1 1039 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 RAB11FIP2Q7L804 512 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 PLXDC1Q8IUK5 500 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 TTC30BQ8N4P2 665 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 DCBLD1Q8N8Z6 715 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 DDX17Q92841 729 aaKnown RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 SDCCAG3Q96C92 435 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 PPP1R9BQ96SB3 815 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 MS4A7Q9GZW8 240 aaPredicted RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 ZNF552Q9H707 407 aaPredicted RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 PRDM8Q9NQV8 689 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 VPS28Q9UK41 221 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 ZMYND8Q9ULU4 1186 aaPredicted RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 CA14Q9ULX7 337 aa6.99□□□□□ -1.29
PBRM1-220ENST00000480064 MAGED1Q9Y5V3 778 aaPredicted RBP6.99□□□□□ -1.29
PBRM1-220ENST00000480064 PI4KAP2A4QPH2 592 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 PABPN1LA6NDY0 278 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 H0Y3Z8 333 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 N4BP3O15049 544 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 USO1O60763 962 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 SEMA7AO75326 666 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 A1BGP04217 495 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 GJB1P08034 283 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TPH1P17752 444 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 FPR1P21462 350 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 CALRP27797 417 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 AKT1P31749 480 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 SLC11A2P49281 568 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 MAN2A2P49641 1150 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 BCAT1P54687 386 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 DUSP2Q05923 314 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 SP140Q13342 867 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 RPS6KA2Q15349 733 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TSTQ16762 297 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 FAXCQ5TGI0 409 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TMEM200BQ69YZ2 307 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TMEM132EQ6IEE7 984 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 MRNIPQ6NTE8 343 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 ZC3H14Q6PJT7 736 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 REPS2Q8NFH8 660 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 STON2Q8WXE9 905 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 GFM2Q969S9 779 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 ATP6V1E2Q96A05 226 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 C3orf49Q96BT1 292 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TWNKQ96RR1 684 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 DDX23Q9BUQ8 820 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 PDCL3Q9H2J4 239 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 BCAS3Q9H6U6 928 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 ELAC1Q9H777 363 aaKnown RBP6.98□□□□□ -1.29
PBRM1-220ENST00000480064 TMEM160Q9NX00 188 aa6.98□□□□□ -1.29
PBRM1-220ENST00000480064 LOC102723971A0A1B0GUV8 181 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 ZNF785A8K8V0 405 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 KIAA0391O15091 583 aaKnown RBP6.97□□□□□ -1.29
PBRM1-220ENST00000480064 COQ9O75208 318 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 INHBBP09529 407 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 GALNSP34059 522 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 ALDH1A3P47895 512 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 CPT1AP50416 773 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 CCR5P51681 352 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 SEC24CP53992 1094 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 UCP3P55916 312 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 PSMC1P62191 440 aaKnown RBP6.97□□□□□ -1.29
PBRM1-220ENST00000480064 CALD1Q05682 793 aaKnown RBP6.97□□□□□ -1.29
PBRM1-220ENST00000480064 CUL4AQ13619 759 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 ERV3-1Q14264 604 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 TAF11Q15544 211 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 PLEKHN1Q494U1 663 aaPredicted RBP6.97□□□□□ -1.29
PBRM1-220ENST00000480064 AMOTQ4VCS5 1084 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 TMTC4Q5T4D3 741 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 ATG16L1Q676U5 607 aa6.97□□□□□ -1.29
PBRM1-220ENST00000480064 RPTNQ6XPR3 784 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms