RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 SETSIPP0DME0 302 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 MMP8P22894 467 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 IGFBP6P24592 240 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 LMO2P25791 158 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 PCSK1P29120 753 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 BRCC3P46736 316 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 GATMP50440 423 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 MON1BQ7L1V2 547 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 THEM5Q8N1Q8 247 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 C1orf131Q8NDD1 294 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 RABGGTAQ92696 567 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 ARHGEF26Q96DR7 871 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 WDR24Q96S15 920 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 MIS12Q9H081 205 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 HESX1Q9UBX0 185 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 DNAJB4Q9UDY4 337 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 CNOT8Q9UFF9 292 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 STRIP2Q9ULQ0 834 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 FAN1Q9Y2M0 1017 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 CAPN6Q9Y6Q1 641 aa12.68□□□□□ -0.38
TM9SF4-206ENST00000479591 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 SYN3O14994 580 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 TADA2AO75478 443 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 ITGB1P05556 798 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 GPD2P43304 727 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 RGS19P49795 217 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 FPGSQ05932 587 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PTP4A2Q12974 167 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 GOLGA7BQ2TAP0 167 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PPP1R26Q5T8A7 1209 aaPredicted RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 SYCE1Q8N0S2 351 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 WDTC1Q8N5D0 677 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 NAPGQ99747 312 aaPredicted RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 C11orf70Q9BRQ4 267 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 MRPL47Q9HD33 250 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 PRG3Q9Y2Y8 225 aaPredicted RBP12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 JRKLQ9Y4A0 524 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 SCINQ9Y6U3 715 aa12.67□□□□□ -0.38
TM9SF4-206ENST00000479591 I3L4J1 428 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 FGBP02675 491 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 GALTP07902 379 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 ACRP10323 421 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 SLC11A1P49279 550 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 BCAT1P54687 386 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 GSCP56915 257 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 SNX16P57768 344 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 YWHAHQ04917 246 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 PSRC1Q6PGN9 363 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 MMS22LQ6ZRQ5 1243 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 CMTR2Q8IYT2 770 aaKnown RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 ANKRD52Q8NB46 1076 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 ZNF564Q8TBZ8 553 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 FAM49BQ9NUQ9 324 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 WDR35Q9P2L0 1181 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 TIMM13Q9Y5L4 95 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-206ENST00000479591 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 HCRTO43612 131 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 PALMO75781 387 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 RRM1P23921 792 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 GABRB2P47870 512 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 BCAR1P56945 870 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 SLC8A3P57103 927 aa12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 PSMC1P62191 440 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-206ENST00000479591 DEFB103AP81534 67 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms