RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 TUBB3Q13509 450 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 DNAJC5GQ8N7S2 189 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 SSH3Q8TE77 659 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 TRIM43Q96BQ3 446 aaPredicted RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 NMD3Q96D46 503 aaKnown RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 PTCD3Q96EY7 689 aaKnown RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 ZNF518BQ9C0D4 1074 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 KIAA1586Q9HCI6 787 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 TESQ9UGI8 421 aaKnown RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 MAST3O60307 1309 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 TMEM191CA6NGB0 347 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 MYO1CO00159 1063 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 PROM1O43490 865 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 FSHBP01225 129 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 XRCC6P12956 609 aaKnown RBP eCLIP6.67□□□□□ -1.34
CCDC58-204ENST00000479414 PHKG2P15735 406 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 PIK3CBP42338 1070 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 AVPR1BP47901 424 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 ZNF134P52741 427 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 RAB32Q13637 225 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 IQCB1Q15051 598 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 SLC44A4Q53GD3 710 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 FAM109AQ8N4B1 249 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 SLC15A4Q8N697 577 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 Q96MF0 132 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 SCAND2PQ9GZW5 306 aaPredicted RBP6.67□□□□□ -1.34
CCDC58-204ENST00000479414 PCED1AQ9H1Q7 454 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 ZNF287Q9HBT7 754 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 CASS4Q9NQ75 786 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 KCTD5Q9NXV2 234 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 AFF4Q9UHB7 1163 aaKnown RBP6.67□□□□□ -1.34
CCDC58-204ENST00000479414 OGDHLQ9ULD0 1010 aa6.67□□□□□ -1.34
CCDC58-204ENST00000479414 F5H697 171 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 TRIAP1O43715 76 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 LOXL3P58215 753 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 KLF10Q13118 480 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 UBE4AQ14139 1066 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 SF3B3Q15393 1217 aaKnown RBP6.66□□□□□ -1.34
CCDC58-204ENST00000479414 VWA1Q6PCB0 445 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 SESTD1Q86VW0 696 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 MICU3Q86XE3 530 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 GAS2L3Q86XJ1 694 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 LDLRAD3Q86YD5 345 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 SLC16A11Q8NCK7 471 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 SLC30A5Q8TAD4 765 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 FBXO41Q8TF61 875 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 MSLNLQ96KJ4 702 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 NELL2Q99435 816 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 MESP1Q9BRJ9 268 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 TTYH3Q9C0H2 523 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 CYP4F11Q9HBI6 524 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 FNIP2Q9P278 1114 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 RGS17Q9UGC6 210 aaPredicted RBP6.66□□□□□ -1.34
CCDC58-204ENST00000479414 CORO2BQ9UQ03 480 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 DMTF1Q9Y222 760 aa6.66□□□□□ -1.34
CCDC58-204ENST00000479414 ANO9A1A5B4 782 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 TMEM233B4DJY2 109 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 F8W8V4 182 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 FOXN1O15353 648 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 C3orf38Q5JPI3 329 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 TMEM108Q6UXF1 575 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 LPIN2Q92539 896 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 PHKBQ93100 1093 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 TBCBQ99426 244 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 AIFM2Q9BRQ8 373 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 AMBRA1Q9C0C7 1298 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 A1CFQ9NQ94 594 aaKnown RBP6.65□□□□□ -1.34
CCDC58-204ENST00000479414 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 COL20A1Q9P218 1284 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 ING1Q9UK53 422 aaPredicted RBP6.65□□□□□ -1.34
CCDC58-204ENST00000479414 PHTF1Q9UMS5 762 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 SHOC2Q9UQ13 582 aa6.65□□□□□ -1.34
CCDC58-204ENST00000479414 EPN1Q9Y6I3 576 aaPredicted RBP6.65□□□□□ -1.34
CCDC58-204ENST00000479414 MBD3L4A6NDZ8 208 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 MBD3L3A6NE82 208 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 FOXN3O00409 490 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 KPNA5O15131 536 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 ESRRBO95718 433 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 NBPF7P0C2Y1 421 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 PPP3CBP16298 524 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 CD6P30203 668 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 PPIFP30405 207 aaKnown RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 PRIM2P49643 509 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 SEC24CP53992 1094 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 RHBDL3P58872 404 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 LILRA4P59901 499 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 DPTQ07507 201 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 FHL2Q14192 279 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 RBM20Q5T481 1227 aaKnown RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 HECTD2Q5U5R9 776 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 SFRP4Q6FHJ7 346 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 LAIR1Q6GTX8 287 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 LAYNQ6UX15 382 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 Q6ZNX1 250 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 BEND2Q8NDZ0 799 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 PTDSS2Q9BVG9 487 aa6.64□□□□□ -1.35
CCDC58-204ENST00000479414 MS4A7Q9GZW8 240 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-204ENST00000479414 KLRC1P26715 233 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms