RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 MRPL45Q9BRJ2 306 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 SLITRK6Q9H5Y7 841 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SAE1Q9UBE0 346 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 ADAM21Q9UKJ8 722 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ITGA11Q9UKX5 1188 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 FAN1Q9Y2M0 1017 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SNX24Q9Y343 169 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 UTP11Q9Y3A2 253 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.37□□□□□ -1.71
USP25-208ENST00000478932 CEP83Q9Y592 693 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 EYSQ5T1H1 3165 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ANK1P16157 1881 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 TCRBV5S1A1TA0A578 114 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 M0QYV0 167 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 LSM8O95777 96 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 CHRNA1P02708 482 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ASGR1P07306 291 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 GNAT1P11488 350 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CYBAP13498 195 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 P4HA1P13674 534 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CCND3P30281 292 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 ATICP31939 592 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 VPS41P49754 854 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RGS7P49802 495 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CRYBB1P53674 252 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 FCGRTP55899 365 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PSMC1P62191 440 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 YWHAEP62258 255 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 PAK2Q13177 524 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 GPS2Q13227 327 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SIX1Q15475 284 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 TAF5Q15542 800 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 TRIP13Q15645 432 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 KCNA10Q16322 511 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CCDC142Q17RM4 750 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 UBXN11Q5T124 520 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 FAM182AQ5T1J6 154 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PPP1R26Q5T8A7 1209 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 SH3PXD2AQ5TCZ1 1133 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SEL1L2Q5TEA6 688 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 DNAJC24Q6P3W2 148 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PRUNE1Q86TP1 453 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 JAMLQ86YT9 394 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 IQCKQ8N0W5 287 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 OR6B3Q8NGW1 331 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 JOSD2Q8TAC2 188 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 FBXO25Q8TCJ0 367 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SNX27Q96L92 541 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ERP44Q9BS26 406 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 NT5C1AQ9BXI3 368 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 B3GNT5Q9BYG0 378 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ZNF518BQ9C0D4 1074 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 AGO3Q9H9G7 860 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 PLEKHA5Q9HAU0 1116 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 XPNPEP3Q9NQH7 507 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CHST7Q9NS84 486 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 MTUS1Q9ULD2 1270 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 BARX2Q9UMQ3 279 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 PCDHGC3Q9UN70 934 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ST3GAL5Q9UNP4 418 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 R3HDM2Q9Y2K5 976 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 IPPQ9Y573 584 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 NME7Q9Y5B8 376 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SIP14410 1827 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 KPNA7A9QM74 516 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 KIF3CO14782 793 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 FSCN2O14926 492 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SEPT4O43236 478 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RNF40O75150 1001 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 MICAL2O94851 1124 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 MYCP01106 439 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 ERBB2P04626 1255 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CALB1P05937 261 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PAEPP09466 180 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RARBP10826 455 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ATF7P17544 494 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 CYP3A5P20815 502 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 IL1R2P27930 398 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CDH5P33151 784 aaPredicted RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 SLC1A1P43005 524 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 DHX9Q08211 1270 aaKnown RBP4.36□□□□□ -1.71
USP25-208ENST00000478932 PDE4CQ08493 712 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 CNGA2Q16280 664 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 KYAT1Q16773 422 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RAB6CQ53S08 254 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 SGO2Q562F6 1265 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 FBXO47Q5MNV8 452 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PPP1R15BQ5SWA1 713 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 MFSD14CQ5VZR4 134 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 C9orf57Q5W0N0 161 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 KCTD16Q68DU8 428 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 DUPD1Q68J44 220 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 PMF1Q6P1K2 205 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 FAM228AQ86W67 206 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RHOT1Q8IXI2 618 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 ARFGAP1Q8N6T3 406 aa4.36□□□□□ -1.71
USP25-208ENST00000478932 RNF169Q8NCN4 708 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms