RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ATP2C2O75185 946 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TACC1O75410 805 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 AFPP02771 609 aaKnown RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 HNRNPA1P09651 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ERCC5P28715 1186 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 NTHL1P78549 312 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ZP2Q05996 745 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TYRO3Q06418 890 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 PDE4CQ08493 712 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 LRMPQ12912 555 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 UVSSAQ2YD98 709 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MDH1BQ5I0G3 518 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 GET4Q7L5D6 327 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 SPATA2LQ8IUW3 424 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ADHFE1Q8IWW8 467 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 STKLD1Q8NE28 680 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 SPATA18Q8TC71 538 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 FAM200AQ8TCP9 573 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MYLPFQ96A32 169 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 ARID3AQ99856 593 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 PHF7Q9BWX1 381 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 SDCBP2Q9H190 292 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 THAP9Q9H5L6 903 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 MAGEC2Q9UBF1 373 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-215ENST00000478531 HMGXB4Q9UGU5 601 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 NME7Q9Y5B8 376 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 PCDHB5Q9Y5E4 795 aa7.37□□□□□ -1.23
BRCA1-215ENST00000478531 DENND4CQ5VZ89 1909 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 SYCE3A1L190 88 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 MYBPHLA2RUH7 354 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 PES1O00541 588 aaKnown RBP7.36□□□□□ -1.23
BRCA1-215ENST00000478531 N4BP1O75113 896 aaKnown RBP7.36□□□□□ -1.23
BRCA1-215ENST00000478531 CYP2F1P24903 491 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 HOXA9P31269 272 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 ALDH1A3P47895 512 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 CETN1Q12798 172 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 KCNH2Q12809 1159 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 NFE2Q16621 373 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-215ENST00000478531 ANO6Q4KMQ2 910 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 PABPC1LQ4VXU2 614 aaKnown RBP7.36□□□□□ -1.23
BRCA1-215ENST00000478531 FAM114A1Q8IWE2 563 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 SPPL2BQ8TCT7 592 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 GPR152Q8TDT2 470 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 ING5Q8WYH8 240 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 GCNT4Q9P109 453 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 CDH9Q9ULB4 789 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 NR2E1Q9Y466 385 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 NFE2L3Q9Y4A8 694 aa7.36□□□□□ -1.23
BRCA1-215ENST00000478531 WDFY4Q6ZS81 3184 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 KCNJ18B7U540 433 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 C2CD4DB7Z1M9 353 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 GPR15P49685 360 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 NDST1P52848 882 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 EPHB3P54753 998 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MARSP56192 900 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PLD1Q13393 1074 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 KCNJ12Q14500 433 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 TAF12Q16514 161 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 C4orf50Q6ZRC1 276 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ACOT1Q86TX2 421 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 SCN4BQ8IWT1 228 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 TDRD5Q8NAT2 981 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 C2orf15Q8WU43 125 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 TATDN2Q93075 761 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PKMYT1Q99640 499 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CRACR2AQ9BSW2 395 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MED10Q9BTT4 135 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 COL25A1Q9BXS0 654 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 WDR6Q9NNW5 1121 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 SAMSN1Q9NSI8 373 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 FAM49BQ9NUQ9 324 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CEP72Q9P209 647 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 DNMT3BQ9UBC3 853 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PRKAG3Q9UGI9 489 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MAFFQ9ULX9 164 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PATJQ8NI35 1801 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 CLDN5O00501 218 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 RHOP08100 348 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 HAPLN1P10915 354 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 MYL4P12829 197 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 PTPN1P18031 435 aaKnown RBP7.35□□□□□ -1.23
BRCA1-215ENST00000478531 ATF6P18850 670 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 BDNFP23560 247 aa7.35□□□□□ -1.23
BRCA1-215ENST00000478531 FSHRP23945 695 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms