RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 EHD2Q9NZN4 543 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SNX9Q9Y5X1 595 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 MIA3Q5JRA6 1907 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 MYBPHLA2RUH7 354 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 NRG2O14511 850 aaPredicted RBP15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 CUTAO60888 179 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 CTHP32929 405 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 PDE6CP51160 858 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 DUOXA2Q1HG44 320 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 CFAP221Q4G0U5 840 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 HS2ST1Q7LGA3 356 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 ZNF687Q8N1G0 1237 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 CEP295NLQ96MC4 621 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 MKNK1Q9BUB5 465 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 TRIM9Q9C026 710 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 KBTBD4Q9NVX7 518 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 FAM13BQ9NYF5 915 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 L1RE1Q9UN81 338 aa15.51■□□□□ 0.07
SMARCE1-209ENST00000478349 GOLGA8IPA6NC78 632 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 SHISA7A6NL88 538 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 GOLGA8JA6NMD2 632 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PAPSS2O95340 614 aaPredicted RBP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PRAMEF12O95522 483 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 CHRNB1P11230 501 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 CNR2P34972 360 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 NLRP12P59046 1061 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 LMNB2Q03252 620 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 FZD5Q13467 585 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PUM1Q14671 1186 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 ATL3Q6DD88 541 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 LRRTM3Q86VH5 581 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 WDR49Q8IV35 697 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 DHX58Q96C10 678 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 RSPRY1Q96DX4 576 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 TRMT2BQ96GJ1 504 aaKnown RBP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PI4K2AQ9BTU6 479 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 IKZF4Q9H2S9 585 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 IL21Q9HBE4 155 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 TDP1Q9NUW8 608 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 INTS13Q9NVM9 706 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 CGNQ9P2M7 1197 aaKnown RBP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 MAGED2Q9UNF1 606 aaPredicted RBP15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 DOCK6Q96HP0 2047 aa15.5■□□□□ 0.07
SMARCE1-209ENST00000478349 CFAP54Q96N23 3096 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 A0A087X0B3 334 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 PRR5-ARHGAP8B1AHC4 643 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 ARHGAP8P85298 464 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 GRSF1Q12849 480 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 ZNF268Q14587 947 aaPredicted RBP15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 PDGFRLQ15198 375 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 LAIR1Q6GTX8 287 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 CNNM4Q6P4Q7 775 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 TSSK4Q6SA08 328 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 DGLUCYQ7Z3D6 616 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 MON1AQ86VX9 555 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 SNX21Q969T3 373 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 HPDLQ96IR7 371 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 GTSE1Q9NYZ3 720 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 HSPBP1Q9NZL4 362 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 CDH9Q9ULB4 789 aa15.49■□□□□ 0.07
SMARCE1-209ENST00000478349 EP300Q09472 2414 aaPredicted RBP15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 NCANO14594 1321 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 TSC2P49815 1807 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 FOXD2O60548 495 aaPredicted RBP15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 ATG13O75143 517 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 NOL4O94818 638 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 ANXA13P27216 316 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 MAGEA11P43364 429 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 E2F4Q16254 413 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 VSTM1Q6UX27 236 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 MAB21L3Q8N8X9 362 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 CCDC26Q8TAB7 109 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 ZFYVE19Q96K21 471 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 SYT15Q9BQS2 421 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 SLC46A2Q9BY10 475 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 CFAP45Q9UL16 551 aa15.48■□□□□ 0.07
SMARCE1-209ENST00000478349 TRAV19A0A0A6YYK7 116 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 GABRDO14764 452 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 LRP3O75074 770 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 F11P03951 625 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 CKMP06732 381 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 USP17L7P0C7H9 530 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 HMGA1P17096 107 aaKnown RBP15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 PFKLP17858 780 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 TNNI1P19237 187 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 ACAT1P24752 427 aaKnown RBP15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 ME1P48163 572 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 SOX9P48436 509 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 TNNC1P63316 161 aa15.47■□□□□ 0.07
SMARCE1-209ENST00000478349 FAM160A1Q05DH4 1040 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms