RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	C2orf15	Q8WU43	125 aa	Known RBP	11.47	□□□□□ -0.57
APTX-222	ENST00000478279	SPIRE2	Q8WWL2	714 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	PIGK	Q92643	395 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	TSPAN18	Q96SJ8	248 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	RUSC1	Q9BVN2	902 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	TPSD1	Q9BZJ3	242 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	HAPLN2	Q9GZV7	340 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	ZCWPW1	Q9H0M4	648 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	DNM3	Q9UQ16	869 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	STK24	Q9Y6E0	443 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	ADAMTS20	P59510	1910 aa		11.47	□□□□□ -0.57
APTX-222	ENST00000478279	ANK1	P16157	1881 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	CELSR3	Q9NYQ7	3312 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	FAM221B	A6H8Z2	402 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	CYP11A1	P05108	521 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	MAPT	P10636	758 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	HAPLN1	P10915	354 aa	Predicted RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	HMGA1	P17096	107 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	NMT1	P30419	496 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	MATR3	P43243	847 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	8e-7	■■■■□ 24.4
APTX-222	ENST00000478279	SMTN	P53814	917 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	SMARCB1	Q12824	385 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	PDIA5	Q14554	519 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	MTF1	Q14872	753 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	SAFB	Q15424	915 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	KYAT1	Q16773	422 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	TRIM61	Q5EBN2	209 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	SPATA1	Q5VX52	437 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	ANO7	Q6IWH7	933 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	C1orf186	Q6ZWK4	172 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	PIP4P1	Q86T03	277 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	TMEM161B	Q8NDZ6	487 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	SPPL2B	Q8TCT7	592 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	SNX29	Q8TEQ0	813 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	OSCP1	Q8WVF1	389 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	MRPS31	Q92665	395 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	GTF3C6	Q969F1	213 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	CNOT6L	Q96LI5	555 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	TIPIN	Q9BVW5	301 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	NUSAP1	Q9BXS6	441 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	DUS2	Q9NX74	493 aa	Known RBP	11.46	□□□□□ -0.57
APTX-222	ENST00000478279	DSE	Q9UL01	958 aa		11.46	□□□□□ -0.57
APTX-222	ENST00000478279	KIAA1549L	Q6ZVL6	1849 aa		11.46	□□□□□ -0.58
APTX-222	ENST00000478279	MYH11	P35749	1972 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	SPAAR	A0A1B0GVQ0	90 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	UPK3BL1	B0FP48	263 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	UPK3BL2	E5RIL1	263 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279		H0Y626	953 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	JAK2	O60674	1132 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	TRIM16	O95361	564 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	CAPNS1	P04632	268 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	ADRB2	P07550	413 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	GUCY2C	P25092	1073 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	RDX	P35241	583 aa	Known RBP	11.45	□□□□□ -0.58
APTX-222	ENST00000478279	TNFSF9	P41273	254 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	IFNAR2	P48551	515 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	CDR1	P51861	262 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	SIM1	P81133	766 aa	Predicted RBP	11.45	□□□□□ -0.58
APTX-222	ENST00000478279	ENOX2	Q16206	610 aa	Known RBP	11.45	□□□□□ -0.58
APTX-222	ENST00000478279	ME3	Q16798	604 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	C9orf57	Q5W0N0	161 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	LRRTM3	Q86VH5	581 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	PROSER1	Q86XN7	944 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	THEM5	Q8N1Q8	247 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	C4orf32	Q8N8J7	132 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	IGSF22	Q8N9C0	903 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	OLIG1	Q8TAK6	271 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	USP33	Q8TEY7	942 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	ATP2A3	Q93084	1043 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	RPF1	Q9H9Y2	349 aa	Known RBP	11.45	□□□□□ -0.58
APTX-222	ENST00000478279	ASH1L	Q9NR48	2969 aa	Known RBP	11.45	□□□□□ -0.58
APTX-222	ENST00000478279	SCN1A	P35498	2009 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	PTPRD	P23468	1912 aa		11.45	□□□□□ -0.58
APTX-222	ENST00000478279	APC2	O95996	2303 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	OBSL1	O75147	1896 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	TSC2	P49815	1807 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	PIR	O00625	290 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	TNFRSF10B	O14763	440 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	CSH1	P0DML2	217 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	CSH2	P0DML3	217 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	PLS3	P13797	630 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	ENG	P17813	658 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	MAPK8	P45983	427 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	GUCY1B3	Q02153	619 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	FAM160A1	Q05DH4	1040 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	NR1H3	Q13133	447 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	SEMA3B	Q13214	749 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	ZNF77	Q15935	545 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	EML3	Q32P44	896 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	C2orf27A	Q580R0	203 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	TTC38	Q5R3I4	469 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	LPCAT2	Q7L5N7	544 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	METTL23	Q86XA0	190 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	SYT12	Q8IV01	421 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	COL26A1	Q96A83	441 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	RAB34	Q9BZG1	259 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	ABI2	Q9NYB9	513 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-222	ENST00000478279	MMP17	Q9ULZ9	603 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	ASXL3	Q9C0F0	2248 aa		11.44	□□□□□ -0.58
APTX-222	ENST00000478279	ANO9	A1A5B4	782 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms