RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	CGN	Q9P2M7	1197 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	AFF4	Q9UHB7	1163 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ITGA11	Q9UKX5	1188 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	INSL5	Q9Y5Q6	135 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	WIPF1	O43516	503 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TADA3	O75528	432 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	LDHA	P00338	332 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	C4BPA	P04003	597 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	OR4Q2	P0C623	313 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	POLR2B	P30876	1174 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	SYK	P43405	635 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	CASP4	P49662	377 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	NUCB2	P80303	420 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	GPR17	Q13304	367 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	SNRNP35	Q16560	246 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	SOWAHA	Q2M3V2	549 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	CENPP	Q6IPU0	288 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM171B	Q6P995	826 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	NPAS3	Q8IXF0	933 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	RASSF8	Q8NHQ8	419 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	SLC7A14	Q8TBB6	771 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TIGD1	Q96MW7	591 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	MED15	Q96RN5	788 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TCHP	Q9BT92	498 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	SDCBP2	Q9H190	292 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TMEM30A	Q9NV96	361 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	YIPF1	Q9Y548	306 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	MUC22	E2RYF6	1773 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	EML5	Q05BV3	1969 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	OR6C75	A6NL08	312 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ARNTL	O00327	626 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	PDXK	O00764	312 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	CAPN5	O15484	640 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	CST3	P01034	146 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ITGB3	P05106	788 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	CEBPB	P17676	345 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	MCM4	P33991	863 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TAF6	P49848	677 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	PMS1	P54277	932 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	DLG4	P78352	724 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	AMPD3	Q01432	767 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	PNOC	Q13519	176 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TDRD10	Q5VZ19	366 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZNF280D	Q6N043	979 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	ARMCX5	Q6P1M9	558 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	GLYCTK	Q8IVS8	523 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	NELFCD	Q8IXH7	590 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	GUF1	Q8N442	669 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TDRD5	Q8NAT2	981 aa	Known RBP	4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	PARD3B	Q8TEW8	1205 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	RSPRY1	Q96DX4	576 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TCEAL4	Q96EI5	215 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRPV4	Q9HBA0	871 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	DUSP12	Q9UNI6	340 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188	NR2E1	Q9Y466	385 aa		4.57	□□□□□ -1.68
POLR2B-208	ENST00000478188		H7C4K7	107 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CLIC2	O15247	247 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CCL16	O15467	120 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRAPPC3	O43617	180 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	NARS	O43776	548 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ASGR2	P07307	311 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ODC1	P11926	461 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	HMGA1	P17096	107 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	WARS	P23381	471 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	WEE1	P30291	646 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM160A1	Q05DH4	1040 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SIGLEC14	Q08ET2	396 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	NR6A1	Q15406	480 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CTXN3	Q4LDR2	81 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	WDR44	Q5JSH3	913 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	WSCD1	Q658N2	575 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	FOXR2	Q6PJQ5	311 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	HFE2	Q6ZVN8	426 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CEP57	Q86XR8	500 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	TOP6BL	Q8N6T0	577 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	UBR7	Q8N806	425 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	XXYLT1	Q8NBI6	393 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	APPL2	Q8NEU8	664 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	RIN3	Q8TB24	985 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SHKBP1	Q8TBC3	707 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SMG7	Q92540	1137 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	RPGRIP1	Q96KN7	1286 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	RPP25	Q9BUL9	199 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	DDX23	Q9BUQ8	820 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	KIAA1586	Q9HCI6	787 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CRTAC1	Q9NQ79	661 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SLC2A4RG	Q9NR83	387 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	KPNA7	A9QM74	516 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SIAH2	O43255	324 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	XPOT	O43592	962 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	LRRN2	O75325	713 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	AKAP3	O75969	853 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	PDGFB	P01127	241 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	NR3C1	P04150	777 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms