RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ITGB3P05106 788 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 PDCP20941 246 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 SYT1P21579 422 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 PNPLA4P41247 253 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 ARHGAP8P85298 464 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 LMNB2Q03252 620 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 SPEM2Q0P670 501 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 SRSF5Q13243 272 aaKnown RBP17.99■□□□□ 0.47
TRIM13-208ENST00000478111 ITPRIPL2Q3MIP1 535 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 RIN3Q8TB24 985 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 USP13Q92995 863 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-208ENST00000478111 ZNF560Q96MR9 790 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 PI4K2AQ9BTU6 479 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 HPS4Q9NQG7 708 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 GKN1Q9NS71 199 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 ZMYM5Q9UJ78 669 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 USP18Q9UMW8 372 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 AGAP1Q9UPQ3 857 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
TRIM13-208ENST00000478111 MORC2Q9Y6X9 1032 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-208ENST00000478111 GCNT3O95395 438 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 RETP07949 1114 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 GARTP22102 1010 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 TFAMQ00059 246 aaKnown RBP17.98■□□□□ 0.47
TRIM13-208ENST00000478111 CEBPZQ03701 1054 aaKnown RBP17.98■□□□□ 0.47
TRIM13-208ENST00000478111 TAF12Q16514 161 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 CCDC142Q17RM4 750 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 SDHAF4Q5VUM1 108 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 TXNDC8Q6A555 127 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 PRR23BQ6ZRT6 265 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 LONP2Q86WA8 852 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 SYNPOQ8N3V7 929 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 MAB21L3Q8N8X9 362 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 LEO1Q8WVC0 666 aaPredicted RBP17.98■□□□□ 0.47
TRIM13-208ENST00000478111 GCNAQ96QF7 691 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 ACBD6Q9BR61 282 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 CBWD1Q9BRT8 395 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 PANK2Q9BZ23 570 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 RAB23Q9ULC3 237 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 PCDHB13Q9Y5F0 798 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 PTPRDP23468 1912 aa17.98■□□□□ 0.47
TRIM13-208ENST00000478111 MYO16Q9Y6X6 1858 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 KMT2BQ9UMN6 2715 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 GOLGA8IPA6NC78 632 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 GOLGA8JA6NMD2 632 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 PRPF40AO75400 957 aaKnown RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 TADA3O75528 432 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 LDHAP00338 332 aaKnown RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 SDHBP21912 280 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 HOXA6P31267 233 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 CNR2P34972 360 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 TSPY1Q01534 308 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 SIM2Q14190 667 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 NFE2Q16621 373 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 PKN3Q6P5Z2 889 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 OSTM1Q86WC4 334 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 LRRC52Q8N7C0 313 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 THG1LQ9NWX6 298 aaKnown RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 GDAP2Q9NXN4 497 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 DDX43Q9NXZ2 648 aaKnown RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 RBAKQ9NYW8 714 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-208ENST00000478111 SIX4Q9UIU6 781 aa17.97■□□□□ 0.47
TRIM13-208ENST00000478111 SOBPA7XYQ1 873 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 HCRTO43612 131 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 EXTL3O43909 919 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 LRP3O75074 770 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 PRPF6O94906 941 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CSH1P0DML2 217 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CSH2P0DML3 217 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 IDEP14735 1019 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 ACAT1P24752 427 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CYP2F1P24903 491 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 DDX6P26196 483 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 AVPR1AP37288 418 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 RUNX3Q13761 415 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 SLC39A14Q15043 492 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 DDR2Q16832 855 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 INTS6LQ5JSJ4 861 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 HEATR6Q6AI08 1181 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 TRIM68Q6AZZ1 485 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 FSTL4Q6MZW2 842 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 MON1AQ86VX9 555 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CACTINQ8WUQ7 758 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 MYRFLQ96LU7 910 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 PCIF1Q9H4Z3 704 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 PDE11AQ9HCR9 933 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 ABCB6Q9NP58 842 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 TDP1Q9NUW8 608 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 PANK4Q9NVE7 773 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 GTF3C4Q9UKN8 822 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.96■□□□□ 0.47
TRIM13-208ENST00000478111 CACNA1BQ00975 2339 aa17.96■□□□□ 0.47
TRIM13-208ENST00000478111 KIAA1549LQ6ZVL6 1849 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 TRDMT1O14717 391 aaKnown RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 GABRDO14764 452 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms