RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 LILRB3O75022 631 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CXCL14O95715 111 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CALCAP01258 141 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CCDC172P0C7W6 258 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CD19P15391 556 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 GNA15P30679 374 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 BPIFB4P59827 614 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 PTK2Q05397 1052 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CAMK1Q14012 370 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 RSPO2Q6UXX9 243 aaPredicted RBP17.22■□□□□ 0.35
VHL-203ENST00000477538 SLC47A2Q86VL8 602 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 GLYCTKQ8IVS8 523 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 DCP1BQ8IZD4 617 aaKnown RBP17.22■□□□□ 0.35
VHL-203ENST00000477538 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
VHL-203ENST00000477538 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CLSTN3Q9BQT9 956 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
VHL-203ENST00000477538 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 CRTAC1Q9NQ79 661 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 FNIP2Q9P278 1114 aa17.22■□□□□ 0.35
VHL-203ENST00000477538 PRRC2BQ5JSZ5 2229 aaKnown RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 TRANK1O15050 2925 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 SOX1O00570 391 aaPredicted RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 LPXNO60711 386 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 OR4Q2P0C623 313 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 VDRP11473 427 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 CPB1P15086 417 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 BRD2P25440 801 aaKnown RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 OR1D2P34982 312 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 PDE6CP51160 858 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 ARPP19P56211 112 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 MAPRE1Q15691 268 aaKnown RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 TSR1Q2NL82 804 aaKnown RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 SLC39A12Q504Y0 691 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 SGO2Q562F6 1265 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 SLC8B1Q6J4K2 584 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 PDE12Q6L8Q7 609 aaKnown RBP17.21■□□□□ 0.35
VHL-203ENST00000477538 IRF2BP2Q7Z5L9 587 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 C12orf29Q8N999 325 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 EPS8L1Q8TE68 723 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 PDLIM2Q96JY6 352 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 PKMYT1Q99640 499 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 GTF3C4Q9UKN8 822 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 KIAA1257Q9ULG3 409 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 IRAK3Q9Y616 596 aa17.21■□□□□ 0.35
VHL-203ENST00000477538 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 C2orf71A6NGG8 1288 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 RFXAPO00287 272 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 TEX28O15482 410 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 ADAM12O43184 909 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 THAP12O43422 761 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 CYP11B1P15538 503 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 HNRNPH3P31942 346 aaKnown RBP17.2■□□□□ 0.34
VHL-203ENST00000477538 IRS1P35568 1242 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 NDUFV1P49821 464 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 GSDMDP57764 484 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 ROR1Q01973 937 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 FAM171BQ6P995 826 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 NOP9Q86U38 636 aaKnown RBP17.2■□□□□ 0.34
VHL-203ENST00000477538 LRRTM3Q86VH5 581 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 MRPL43Q8N983 215 aaKnown RBP17.2■□□□□ 0.34
VHL-203ENST00000477538 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 TFAP2BQ92481 460 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 EMILIN2Q9BXX0 1053 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 TMLHEQ9NVH6 421 aa17.2■□□□□ 0.34
VHL-203ENST00000477538 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
VHL-203ENST00000477538 DENND4CQ5VZ89 1909 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 LAMA3Q16787 3333 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 HIDE1A8MVS5 230 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 MED7O43513 233 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
VHL-203ENST00000477538 CCDC130P13994 396 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 PRKCIP41743 596 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 CYP27A1Q02318 531 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 KLHL30Q0D2K2 578 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 GPR17Q13304 367 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 STILQ15468 1287 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 PTPROQ16827 1216 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 PPP1R26Q5T8A7 1209 aaPredicted RBP17.19■□□□□ 0.34
VHL-203ENST00000477538 ARHGAP17Q68EM7 881 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 CCDC186Q7Z3E2 898 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 ZNF606Q8WXB4 792 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 MYLPFQ96A32 169 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 CYFIP2Q96F07 1278 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 PCED1BQ96HM7 432 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
VHL-203ENST00000477538 DOCK6Q96HP0 2047 aa17.19■□□□□ 0.34
VHL-203ENST00000477538 WDR27A2RRH5 827 aa17.18■□□□□ 0.34
VHL-203ENST00000477538 O00370 1275 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms