RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 NR1I3Q14994 352 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 ARHGAP44Q17R89 818 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 MDH1BQ5I0G3 518 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 IQCEQ6IPM2 695 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 FAM171BQ6P995 826 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 CYP3A43Q9HB55 503 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 FBXW11Q9UKB1 542 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 PRUNE2Q8WUY3 3088 aa16.94■□□□□ 0.3
COPS3-207ENST00000477299 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 SERPINC1P01008 464 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 FAM163BP0C2L3 166 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 GPR15P49685 360 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 CACNA2D1P54289 1103 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 RAD23BP54727 409 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 KLHDC7AQ5VTJ3 777 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 TMEM184AQ6ZMB5 413 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 PAQR9Q6ZVX9 377 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 SLC4A11Q8NBS3 891 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 STKLD1Q8NE28 680 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 SPATA18Q8TC71 538 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 PABPC5Q96DU9 382 aaKnown RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 CDCA3Q99618 268 aaPredicted RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 GANQ9H2C0 597 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 CYP4F11Q9HBI6 524 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 ACP6Q9NPH0 428 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 TMEM30AQ9NV96 361 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 DNAJC12Q9UKB3 198 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 CDH9Q9ULB4 789 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 FHOD1Q9Y613 1164 aa16.93■□□□□ 0.3
COPS3-207ENST00000477299 TCF20Q9UGU0 1960 aaKnown RBP16.93■□□□□ 0.3
COPS3-207ENST00000477299 CCDC130P13994 396 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 ATF2P15336 505 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 CYP2F1P24903 491 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 PCSK1P29120 753 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 TSPY1Q01534 308 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 TFF2Q03403 129 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 FKBP15Q5T1M5 1219 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 SDHAF4Q5VUM1 108 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 ANKRD54Q6NXT1 300 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 CRYBG2Q8N1P7 616 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 B3GALNT2Q8NCR0 500 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 SLC7A14Q8TBB6 771 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 MYLPFQ96A32 169 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 PCED1BQ96HM7 432 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 ERGIC2Q96RQ1 377 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 ZSWIM1Q9BR11 485 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 UBE2ZQ9H832 354 aaPredicted RBP16.92■□□□□ 0.3
COPS3-207ENST00000477299 FAM207AQ9NSI2 230 aaPredicted RBP16.92■□□□□ 0.3
COPS3-207ENST00000477299 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 ABI2Q9NYB9 513 aaPredicted RBP16.92■□□□□ 0.3
COPS3-207ENST00000477299 APEX2Q9UBZ4 518 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 AFF4Q9UHB7 1163 aaKnown RBP16.92■□□□□ 0.3
COPS3-207ENST00000477299 PCDHB4Q9Y5E5 795 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 A0A0C4DFX4 3053 aa16.92■□□□□ 0.3
COPS3-207ENST00000477299 C8AP07357 584 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 KCNA5P22460 613 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 SSTR3P32745 418 aaPredicted RBP16.91■□□□□ 0.3
COPS3-207ENST00000477299 UBASH3AP57075 661 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 GCNT1Q02742 428 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 RARS2Q5T160 578 aaKnown RBP16.91■□□□□ 0.3
COPS3-207ENST00000477299 TPGS2Q68CL5 300 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 TMEM270Q6UE05 265 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 TMC5Q6UXY8 1006 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 UNC93AQ86WB7 457 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 DCP1BQ8IZD4 617 aaKnown RBP16.91■□□□□ 0.3
COPS3-207ENST00000477299 MYCBPAPQ8TBZ2 947 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 GPR152Q8TDT2 470 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 MSLNLQ96KJ4 702 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
COPS3-207ENST00000477299 ZNF518BQ9C0D4 1074 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 XPO4Q9C0E2 1151 aaKnown RBP16.91■□□□□ 0.3
COPS3-207ENST00000477299 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 S1PR5Q9H228 398 aa16.91■□□□□ 0.3
COPS3-207ENST00000477299 FOXN3O00409 490 aaPredicted RBP16.9■□□□□ 0.3
COPS3-207ENST00000477299 PRRG1O14668 218 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 CCL16O15467 120 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 ZMYND10O75800 440 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 TPM2P07951 284 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 BDNFP23560 247 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 TBXAS1P24557 533 aaPredicted RBP16.9■□□□□ 0.3
COPS3-207ENST00000477299 TPM4P67936 248 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 CYP27A1Q02318 531 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 FUKQ8N0W3 1084 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 CASP10Q92851 521 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 ZNF707Q96C28 371 aaPredicted RBP16.9■□□□□ 0.3
COPS3-207ENST00000477299 TMEM176AQ96HP8 235 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms