RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CYP2W1Q8TAV3 490 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 CAMK1GQ96NX5 476 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 PUS7Q96PZ0 661 aaKnown RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 OSBPL9Q96SU4 736 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 SMOQ99835 787 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 SLCO5A1Q9H2Y9 848 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 SCAF8Q9UPN6 1271 aaKnown RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 C4orf47A7E2U8 309 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 PDHA1P08559 390 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 HOXD9P28356 352 aaPredicted RBP3.47□□□□□ -1.85
XRN1-211ENST00000477237 GPR3P46089 330 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 ALDH9A1P49189 494 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 ZNF280AP59817 542 aaPredicted RBP3.47□□□□□ -1.85
XRN1-211ENST00000477237 TMPRSS15P98073 1019 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 RNF180Q86T96 592 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 ADHFE1Q8IWW8 467 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 ATRIPQ8WXE1 791 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 AHCYL2Q96HN2 611 aaKnown RBP3.47□□□□□ -1.85
XRN1-211ENST00000477237 SMOC2Q9H3U7 446 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 SERHLQ9NQF3 203 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 CCM2LQ9NUG4 571 aaPredicted RBP3.47□□□□□ -1.85
XRN1-211ENST00000477237 TDP1Q9NUW8 608 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 JKAMPQ9P055 326 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 PCDHA13Q9Y5I0 950 aa3.47□□□□□ -1.85
XRN1-211ENST00000477237 E9PLN8 166 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 H3BNX3 289 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 POLRMTO00411 1230 aaKnown RBP3.46□□□□□ -1.86
XRN1-211ENST00000477237 TOMM40O96008 361 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 TNFRSF1BP20333 461 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 ZNF585BQ52M93 769 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 PIP4P1Q86T03 277 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 TMPRSS12Q86WS5 348 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 AOPEPQ8N6M6 819 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 FAM118BQ9BPY3 351 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 VKORC1Q9BQB6 163 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 SQORQ9Y6N5 450 aa3.46□□□□□ -1.86
XRN1-211ENST00000477237 SLC43A1O75387 559 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 T-ENOLP0DO92 83 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 PSG1P11464 419 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 CHRM3P20309 590 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 LPOP22079 712 aaPredicted RBP3.45□□□□□ -1.86
XRN1-211ENST00000477237 CDKN2AP42771 156 aaKnown RBP3.45□□□□□ -1.86
XRN1-211ENST00000477237 MTNR1BP49286 362 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 TARDBPQ13148 414 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-211ENST00000477237 CLUL1Q15846 466 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 RBM20Q5T481 1227 aaKnown RBP3.45□□□□□ -1.86
XRN1-211ENST00000477237 FCRL6Q6DN72 434 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 FBXL22Q6P050 247 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 TRIM72Q6ZMU5 477 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 ZNF365Q70YC5 407 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 MIGA2Q7L4E1 593 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 WDR53Q7Z5U6 358 aaPredicted RBP3.45□□□□□ -1.86
XRN1-211ENST00000477237 RFX6Q8HWS3 928 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-211ENST00000477237 IL17RDQ8NFM7 739 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 TMEM255BQ8WV15 326 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 NR4A3Q92570 626 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 DUSP22Q9NRW4 184 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-211ENST00000477237 GPR45Q9Y5Y3 372 aa3.45□□□□□ -1.86
XRN1-211ENST00000477237 PRSS47A8MTI9 375 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 VPS4BO75351 444 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 CYP2A6P11509 494 aaPredicted RBP3.44□□□□□ -1.86
XRN1-211ENST00000477237 ENGP17813 658 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 PSMC1P62191 440 aaKnown RBP3.44□□□□□ -1.86
XRN1-211ENST00000477237 ZNF618Q5T7W0 954 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 GADL1Q6ZQY3 521 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 KIAA0907Q7Z7F0 614 aaPredicted RBP3.44□□□□□ -1.86
XRN1-211ENST00000477237 FAM109AQ8N4B1 249 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 FAM136AQ96C01 138 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 POT1Q9NUX5 634 aa3.44□□□□□ -1.86
XRN1-211ENST00000477237 SAP30BPQ9UHR5 308 aaKnown RBP3.44□□□□□ -1.86
XRN1-211ENST00000477237 PPM1DO15297 605 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 TGFB3P10600 412 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 LIPAP38571 399 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 GYS2P54840 703 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 STAT4Q14765 748 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 CT47A1Q5JQC4 288 aaPredicted RBP3.43□□□□□ -1.86
XRN1-211ENST00000477237 MEX3CQ5U5Q3 659 aaKnown RBP3.43□□□□□ -1.86
XRN1-211ENST00000477237 VPS53Q5VIR6 699 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 MAVSQ7Z434 540 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 JAZF1Q86VZ6 243 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 AMOTL1Q8IY63 956 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 PELI3Q8N2H9 469 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 IFI44Q8TCB0 444 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 DRC1Q96MC2 740 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 TINAGL1Q9GZM7 467 aaPredicted RBP3.43□□□□□ -1.86
XRN1-211ENST00000477237 WASHC2AQ641Q2 1341 aa3.43□□□□□ -1.86
XRN1-211ENST00000477237 IFITM10A6NMD0 228 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 ZNF785A8K8V0 405 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 POC1B-GALNT4F8VUJ3 575 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 BRINP1O60477 761 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 PRKD3O94806 890 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 ITGALP20701 1170 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 AGXTP21549 392 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 CD6P30203 668 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 CLCN2P51788 898 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 HILS1P60008 231 aa3.42□□□□□ -1.86
XRN1-211ENST00000477237 CDC42EP1Q00587 391 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms