RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZCCHC14Q8WYQ9 949 aaKnown RBP12.32□□□□□ -0.44
BRCA1-213ENST00000476777 TDP1Q9NUW8 608 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
BRCA1-213ENST00000476777 MYO18AQ92614 2054 aaKnown RBP12.32□□□□□ -0.44
BRCA1-213ENST00000476777 MYO16Q9Y6X6 1858 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 SOBPA7XYQ1 873 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 PATE3B3GLJ2 98 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 XPOTO43592 962 aaKnown RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 FAM189A1O60320 539 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 ADRB2P07550 413 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 HAPLN1P10915 354 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 HMGA1P17096 107 aaKnown RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 DDX6P26196 483 aaKnown RBP eCLIP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 MATR3P43243 847 aaKnown RBP eCLIP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 IRX4P78413 519 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 ENOX2Q16206 610 aaKnown RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 TAF12Q16514 161 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 SPATA1Q5VX52 437 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 LRRTM3Q86VH5 581 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 DEFB124Q8NES8 71 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 ACDQ96AP0 544 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-213ENST00000476777 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 KIF9Q9HAQ2 790 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 TSC2P49815 1807 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
BRCA1-213ENST00000476777 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 PIRO00625 290 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 BCKDHBP21953 392 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 PAX3P23760 479 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 CDC25AP30304 524 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 DGKEP52429 567 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 SMTNP53814 917 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-213ENST00000476777 NBR1Q14596 966 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 UAP1L1Q3KQV9 507 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
BRCA1-213ENST00000476777 C9orf57Q5W0N0 161 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 CYP2U1Q7Z449 544 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 C11orf74Q86VG3 221 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 MON1AQ86VX9 555 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
BRCA1-213ENST00000476777 CD101Q93033 1021 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 EXOC4Q96A65 974 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 MMTAG2Q9BU76 263 aaKnown RBP12.3□□□□□ -0.44
BRCA1-213ENST00000476777 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
BRCA1-213ENST00000476777 KCNG1Q9UIX4 513 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 PTPRDP23468 1912 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
BRCA1-213ENST00000476777 OBSL1O75147 1896 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 HYAL3O43820 417 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-213ENST00000476777 ANAPC15P60006 121 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 SMARCB1Q12824 385 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 PSMD2Q13200 908 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 MTF1Q14872 753 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 IL17AQ16552 155 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 KYAT1Q16773 422 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 JADE1Q6IE81 842 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 CPA6Q8N4T0 437 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 SPPL2BQ8TCT7 592 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 BICD1Q96G01 975 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 C8orf76Q96K31 380 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 TPSD1Q9BZJ3 242 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
BRCA1-213ENST00000476777 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
BRCA1-213ENST00000476777 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-213ENST00000476777 DSEQ9UL01 958 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
BRCA1-213ENST00000476777 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 OGTO15294 1046 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 TADA3O75528 432 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 NFICP08651 508 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 DHPSP49366 369 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-213ENST00000476777 ZNF77Q15935 545 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 EML3Q32P44 896 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 ANO7Q6IWH7 933 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 CD302Q8IX05 232 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 STKLD1Q8NE28 680 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 USP33Q8TEY7 942 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 PIGKQ92643 395 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
BRCA1-213ENST00000476777 KCNN1Q92952 543 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms