RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NOMO3P69849 1222 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 H2AFVQ71UI9 128 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF771Q7L3S4 317 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-217ENST00000475693 CEP57Q86XR8 500 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 CAPN6Q9Y6Q1 641 aa19.2■□□□□ 0.66
ATG4B-217ENST00000475693 COL4A6Q14031 1691 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 O00370 1275 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 GABRDO14764 452 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 AMHP03971 560 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 ALDH2P05091 517 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 PAEPP09466 180 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF569Q5MCW4 686 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 TMEM240Q5SV17 173 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 FAXDC2Q96IV6 333 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 C11orf70Q9BRQ4 267 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 CWH43Q9H720 699 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 TSPAN16Q9UKR8 245 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 FAN1Q9Y2M0 1017 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 MYBPHLA2RUH7 354 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 M0QYV0 167 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 RTN2O75298 545 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 WARSP23381 471 aaKnown RBP19.19■□□□□ 0.66
ATG4B-217ENST00000475693 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
ATG4B-217ENST00000475693 SGO2Q562F6 1265 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 ACAD10Q6JQN1 1059 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 MMS22LQ6ZRQ5 1243 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 UROC1Q96N76 676 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 RHOBTB2Q9BYZ6 727 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 CRTAC1Q9NQ79 661 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 GTF3C4Q9UKN8 822 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 COG5Q9UP83 839 aa19.19■□□□□ 0.66
ATG4B-217ENST00000475693 OR4Q2P0C623 313 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 VDRP11473 427 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 GOLGA7BQ2TAP0 167 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 SPOUT1Q5T280 376 aaKnown RBP19.18■□□□□ 0.66
ATG4B-217ENST00000475693 CYP4A22Q5TCH4 519 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 TTC30AQ86WT1 665 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF677Q86XU0 584 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 OR10T2Q8NGX3 314 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 SLC2A14Q8TDB8 520 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 DNAI1Q9UI46 699 aa19.18■□□□□ 0.66
ATG4B-217ENST00000475693 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
ATG4B-217ENST00000475693 M0QZQ0 153 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 PJA2O43164 708 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 PFKMP08237 780 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 CAPN2P17655 700 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 MDH1BQ5I0G3 518 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 SLC35F6Q8N357 371 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 B3GALNT2Q8NCR0 500 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF689Q96CS4 500 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-217ENST00000475693 BTBD6Q96KE9 485 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 SUSD3Q96L08 255 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 ADAM28Q9UKQ2 775 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 LTBP2Q14767 1821 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 PTPRSQ13332 1948 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 GOLGA6L9A6NEM1 432 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 HOXA2O43364 376 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 KRT86O43790 486 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 ODC1P11926 461 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 PTPN1P18031 435 aaKnown RBP19.17■□□□□ 0.66
ATG4B-217ENST00000475693 NOP2P46087 812 aaKnown RBP19.17■□□□□ 0.66
ATG4B-217ENST00000475693 RGS7P49802 495 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.664e-8■■□□□ 12.4
ATG4B-217ENST00000475693 FAM171A1Q5VUB5 890 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 LRRC43Q8N309 656 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 TRIM7Q9C029 511 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 TMLHEQ9NVH6 421 aa19.17■□□□□ 0.66
ATG4B-217ENST00000475693 MRPL42Q9Y6G3 142 aaKnown RBP19.17■□□□□ 0.66
ATG4B-217ENST00000475693 ENC1O14682 589 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 ATP8B1O43520 1251 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 GZMAP12544 262 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 RRM1P23921 792 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 ANXA13P27216 316 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 NSFP46459 744 aaKnown RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 CNGA2Q16280 664 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 UNC93AQ86WB7 457 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 MCOLN2Q8IZK6 566 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 CRYBG2Q8N1P7 616 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 SLC35G2Q8TBE7 412 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 SECISBP2LQ93073 1101 aaKnown RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 RC3H2Q9HBD1 1191 aaKnown RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF446Q9NWS9 450 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■■□□□ 13.7
ATG4B-217ENST00000475693 HYOU1Q9Y4L1 999 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 V9GYY5 206 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 MYH10P35580 1976 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 TNRC18O15417 2968 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 BEST1O76090 585 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 CENPCQ03188 943 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 OVOS1Q6IE37 1185 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 CPNE8Q86YQ8 564 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 ZNF653Q96CK0 615 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 CPXM1Q96SM3 734 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 YME1L1Q96TA2 773 aa19.16■□□□□ 0.66
ATG4B-217ENST00000475693 ARGLU1Q9NWB6 273 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-217ENST00000475693 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms