RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 JADE1Q6IE81 842 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 WDR59Q6PJI9 974 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 DCLRE1AQ6PJP8 1040 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 GLB1LQ6UWU2 654 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 ADGRD2Q7Z7M1 963 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 RBM23Q86U06 439 aaKnown RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 UNC93AQ86WB7 457 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 CCAR2Q8N163 923 aaKnown RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 KLHL23Q8NBE8 558 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 URGCPQ8TCY9 931 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 PLEKHO2Q8TD55 490 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 ATOH1Q92858 354 aaPredicted RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 HPDLQ96IR7 371 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 VCPIP1Q96JH7 1222 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 RPGRIP1Q96KN7 1286 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 ZNF830Q96NB3 372 aaPredicted RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 NIF3L1Q9GZT8 377 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 TLE6Q9H808 572 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 SIX2Q9NPC8 291 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 SPTLC3Q9NUV7 552 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM161AQ9NX61 479 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 GDAP2Q9NXN4 497 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 STK39Q9UEW8 545 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 PPP2R2CQ9Y2T4 447 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 PAXBP1Q9Y5B6 917 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 ADGRG1Q9Y653 693 aa7.49□□□□□ -1.21
SHQ1-207ENST00000475558 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
SHQ1-207ENST00000475558 FAM186AA6NE01 2351 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MYH9P35579 1960 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ANO9A1A5B4 782 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 BTNL10A8MVZ5 291 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PIRO00625 290 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 KIF5CO60282 957 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 HUS1O60921 280 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 RNF40O75150 1001 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TACC1O75410 805 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 VNN1O95497 513 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 GLP2RO95838 553 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ALDH2P05091 517 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 EDN1P05305 212 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 FGFR4P22455 802 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 EIF4A3P38919 411 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MAGEA1P43355 309 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 LHX1P48742 406 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TAF6P49848 677 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 KLK7P49862 253 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PDE6CP51160 858 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MYL6P60660 151 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TUBB4BP68371 445 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 NOP14P78316 857 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CDR2Q01850 454 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 LRMPQ12912 555 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 GRIK3Q13003 919 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 NAB2Q15742 525 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PTPN21Q16825 1174 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ARHGAP44Q17R89 818 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 SV2CQ496J9 727 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ARHGAP29Q52LW3 1261 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 KIAA1328Q86T90 577 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 RTN4RL1Q86UN2 441 aaPredicted RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ECHDC2Q86YB7 292 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM139Q8IV31 216 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CRIPAKQ8N1N5 446 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM86AQ8N2M4 240 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TOP6BLQ8N6T0 577 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 C1orf127Q8N9H9 656 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MSANTD4Q8NCY6 345 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 SMG8Q8ND04 991 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ZSWIM2Q8NEG5 633 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 OR5B17Q8NGF7 314 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 SEMA4DQ92854 862 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TATDN2Q93075 761 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 ASIC4Q96FT7 647 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 FAM193BQ96PV7 902 aaPredicted RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CDCA3Q99618 268 aaPredicted RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CHP1Q99653 195 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 AGPAT1Q99943 283 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 EIF2AQ9BY44 585 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MRPL9Q9BYD2 267 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 MTMR12Q9C0I1 747 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PDCL3Q9H2J4 239 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 KCNF1Q9H3M0 494 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 DOCK5Q9H7D0 1870 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 AGO3Q9H9G7 860 aaKnown RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 RSAD1Q9HA92 442 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 IL21Q9HBE4 155 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms