RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TRIM23P36406 574 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 RGS2P41220 211 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 ECE1P42892 770 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 NR2C2P49116 596 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TUBP50607 506 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 HSD17B7P56937 341 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TMPRSS15P98073 1019 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 RELAQ04206 551 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 KLHL30Q0D2K2 578 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 RAPGEF1Q13905 1077 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SIM2Q14190 667 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 ME3Q16798 604 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 MYLK3Q32MK0 819 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SGO2Q562F6 1265 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM133BQ5BKY9 247 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 METTL21CQ5VZV1 264 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 DENND2CQ68D51 928 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 OGFOD2Q6N063 350 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 GALNT7Q86SF2 657 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PATL1Q86TB9 770 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PALB2Q86YC2 1186 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TTC8Q8TAM2 541 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PANK1Q8TE04 598 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CCT6BQ92526 530 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SH3KBP1Q96B97 665 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CCDC127Q96BQ5 260 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 INTS12Q96CB8 462 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SCLYQ96I15 445 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CIB1Q99828 191 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TTPALQ9BTX7 342 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 MRPL9Q9BYD2 267 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 KRT23Q9C075 422 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CDH19Q9H159 772 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 EPB41L1Q9H4G0 881 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PSTPIP2Q9H939 334 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PLEKHA5Q9HAU0 1116 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 ARNT2Q9HBZ2 717 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 VTA1Q9NP79 307 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 FARSBQ9NSD9 589 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 INTUQ9ULD6 942 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 NOB1Q9ULX3 412 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PCDHB6Q9Y5E3 794 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PPP2R3BQ9Y5P8 575 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 USP47Q96K76 1375 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 PIK3C2BO00750 1634 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CLTCL1P53675 1640 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 RIMS2Q9UQ26 1411 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 VWA3AA6NCI4 1184 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 LRRC72A6NJI9 287 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 RASA4O43374 803 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ORC4O43929 436 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 BRINP1O60477 761 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 DLX3O60479 287 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 PFKFB2O60825 505 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 OR5F1O95221 314 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CRYZL1O95825 349 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CDK4P11802 303 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 KRT13P13646 458 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 IL10P22301 178 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TBXAS1P24557 533 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 RPL9P32969 192 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ADCY8P40145 1251 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CASP2P42575 452 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 HSD17B4P51659 736 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 AFF1P51825 1210 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ALDH18A1P54886 795 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MAP3K7CLP57077 242 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 GABREP78334 506 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ID3Q02535 119 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MAP3K12Q12852 859 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 PDCLQ13371 301 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TCIRG1Q13488 830 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 STX1AQ16623 288 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MOGQ16653 247 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 C6orf183Q5T699 404 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 RNASEH2BQ5TBB1 312 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 SPECC1LQ69YQ0 1117 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 Q6ZNX1 250 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 PNMA8AQ86V59 439 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 SPATA2LQ8IUW3 424 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 NUP93Q8N1F7 819 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TMEM57Q8N5G2 664 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 GALNT11Q8NCW6 608 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 SPATA18Q8TC71 538 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 CALML6Q8TD86 181 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 DHX58Q96C10 678 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TMA16Q96EY4 203 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 EGLN2Q96KS0 407 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 MRGPRX3Q96LB0 322 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 DHRS9Q9BPW9 319 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 TUBA1CQ9BQE3 449 aa6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 GPATCH1Q9BRR8 931 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-215ENST00000475319 FOXP3Q9BZS1 431 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms