RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TRMT1Q9NXH9 659 aaKnown RBP10.98□□□□□ -0.65
COL12A1-206ENST00000474564 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
COL12A1-206ENST00000474564 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 SOWAHDA6NJG2 315 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 M0QYV0 167 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 KRT86O43790 486 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF500O60304 480 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ITGB1P05556 798 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 MMEP08473 750 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 H2AFZP0C0S5 128 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 FAM200BP0CF97 657 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 MYBL1P10243 752 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 BRD2P25440 801 aaKnown RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 LMO2P25791 158 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 PBX3P40426 434 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ACADSBP45954 432 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 RABGGTBP53611 331 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 BCAT1P54687 386 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ARPP19P56211 112 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 PSMD5Q16401 504 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 MDH1BQ5I0G3 518 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 INTS6LQ5JSJ4 861 aaKnown RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 HGSNATQ68CP4 663 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 SCARA3Q6AZY7 606 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 H2AFVQ71UI9 128 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 TMC7Q7Z402 723 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ERICH1Q86X53 443 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 C17orf53Q8N3J3 647 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 CTNNBL1Q8WYA6 563 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 PIK3R5Q8WYR1 880 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 PPP2R3CQ969Q6 453 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 VCPIP1Q96JH7 1222 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 HNRNPABQ99729 332 aaKnown RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 GPR62Q9BZJ7 368 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 NGRNQ9NPE2 291 aaKnown RBP10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ENTPD7Q9NQZ7 604 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 MARCH5Q9NX47 278 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 DPP7Q9UHL4 492 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 INTUQ9ULD6 942 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 STRIP2Q9ULQ0 834 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 MAFFQ9ULX9 164 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 BACE2Q9Y5Z0 518 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
COL12A1-206ENST00000474564 ALPK3Q96L96 1907 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PDCD11Q14690 1871 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 LINC01553A4QN01 128 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 KIF2AO00139 706 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 C2CD2LO14523 706 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 B4GALT3O60512 393 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 CXCL14O95715 111 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 FTLP02792 175 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 CALB1P05937 261 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PLEKP08567 350 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 ACAT1P24752 427 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 ADORA2BP29275 332 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 NAP1L1P55209 391 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PSMC1P62191 440 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 DSG1Q02413 1049 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 GFPT1Q06210 699 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 BST2Q10589 180 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 SMC1AQ14683 1233 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PTPN14Q15678 1187 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 CLEC16AQ2KHT3 1053 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 GOLGA7BQ2TAP0 167 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 ACAD10Q6JQN1 1059 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 CD300LGQ6UXG3 332 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 TMEM130Q8N3G9 435 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 SPPL2BQ8TCT7 592 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 SMARCD1Q96GM5 515 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 MRPL47Q9HD33 250 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 ST7Q9NRC1 585 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 FAM49BQ9NUQ9 324 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 NAGPAQ9UK23 515 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 NOCTQ9UK39 431 aaKnown RBP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL12A1-206ENST00000474564 PCDHA13Q9Y5I0 950 aa10.96□□□□□ -0.65
COL12A1-206ENST00000474564 A0A087X0T9 212 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TMCO5BA8MYB1 307 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 C5orf67F2Z3F1 127 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 O00370 1275 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 MICAL2O94851 1124 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 412 ms