RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZNF518BQ9C0D4 1074 aa21.63■■□□□ 1.05
CDHR3-210ENST00000474330 DNAI2Q9GZS0 605 aa21.63■■□□□ 1.05
CDHR3-210ENST00000474330 LHX5Q9H2C1 402 aa21.63■■□□□ 1.05
CDHR3-210ENST00000474330 SALL4Q9UJQ4 1053 aa21.63■■□□□ 1.05
CDHR3-210ENST00000474330 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
CDHR3-210ENST00000474330 GATMP50440 423 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 STILQ15468 1287 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 ZNF569Q5MCW4 686 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 WSCD1Q658N2 575 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 PASD1Q8IV76 773 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 TMEM35BQ8NCS4 154 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 SPATA18Q8TC71 538 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 PHOSPHO2Q8TCD6 241 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 THAP2Q9H0W7 228 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 NRDE2Q9H7Z3 1164 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 MYH10P35580 1976 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 UNC80Q8N2C7 3258 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 TMEM265A0A087WTH1 108 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 M0QZQ0 153 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 O00370 1275 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 UPP2O95045 317 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 KIF4AO95239 1232 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 ABCB4P21439 1286 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 LMO2P25791 158 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 SSTR3P32745 418 aaPredicted RBP21.62■■□□□ 1.05
CDHR3-210ENST00000474330 GPC5P78333 572 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 DEFB103AP81534 67 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 NAA35Q5VZE5 725 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 TMCO2Q7Z6W1 182 aaPredicted RBP21.62■■□□□ 1.05
CDHR3-210ENST00000474330 ACOT1Q86TX2 421 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 OSTM1Q86WC4 334 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 CPA5Q8WXQ8 436 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 TOP1MTQ969P6 601 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 DNAI1Q9UI46 699 aa21.62■■□□□ 1.05
CDHR3-210ENST00000474330 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDHR3-210ENST00000474330 NCANO14594 1321 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 CYP11A1P05108 521 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 ODC1P11926 461 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 NSFP46459 744 aaKnown RBP21.61■■□□□ 1.05
CDHR3-210ENST00000474330 BRCC3P46736 316 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 OR1G1P47890 313 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 LHX1P48742 406 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 MYO9BQ13459 2157 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 PAN2Q504Q3 1202 aaKnown RBP21.61■■□□□ 1.05
CDHR3-210ENST00000474330 PHF13Q86YI8 300 aaPredicted RBP21.61■■□□□ 1.05
CDHR3-210ENST00000474330 TNIP3Q96KP6 325 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 SUSD3Q96L08 255 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 NOX5Q96PH1 765 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 WDR24Q96S15 920 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 SLC9A7Q96T83 725 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 CDX2Q99626 313 aaPredicted RBP21.61■■□□□ 1.05
CDHR3-210ENST00000474330 ZNF576Q9H609 170 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 DNAJB4Q9UDY4 337 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 CEP83Q9Y592 693 aa21.61■■□□□ 1.05
CDHR3-210ENST00000474330 ARHGEF37A1IGU5 675 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 TBKBP1A7MCY6 615 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 PDGFRBP09619 1106 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 GRIN2CQ14957 1233 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 TCEAL1Q15170 157 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 RAB30Q15771 203 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 LCLAT1Q6UWP7 414 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 HERC6Q8IVU3 1022 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 MCOLN2Q8IZK6 566 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 SLC35F6Q8N357 371 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 WDTC1Q8N5D0 677 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 TRIM58Q8NG06 486 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 KIF18AQ8NI77 898 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 RFFLQ8WZ73 363 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 VCPIP1Q96JH7 1222 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 NKX2-4Q9H2Z4 354 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 DPEP3Q9H4B8 488 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 GTF3C4Q9UKN8 822 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 PCDHA11Q9Y5I1 949 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 TSC2P49815 1807 aa21.6■■□□□ 1.05
CDHR3-210ENST00000474330 HCRTO43612 131 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 BUB1O43683 1085 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 DGKIO75912 1065 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 MICAL2O94851 1124 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 MOCS3O95396 460 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 ITGB1P05556 798 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 ARHGAP17Q68EM7 881 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 DENND1BQ6P3S1 775 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 C12orf29Q8N999 325 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 HASPINQ8TF76 798 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 ARHGEF26Q96DR7 871 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 TRIM11Q96F44 468 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 TMEM175Q9BSA9 504 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 MSRAQ9UJ68 235 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 DSEQ9UL01 958 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 CAPN6Q9Y6Q1 641 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 COL4A6Q14031 1691 aa21.59■■□□□ 1.05
CDHR3-210ENST00000474330 FAM170AA1A519 330 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 FANCGO15287 622 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 ALDH2P05091 517 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 MYBL1P10243 752 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 NAP1L1P55209 391 aaKnown RBP21.58■■□□□ 1.05
CDHR3-210ENST00000474330 IFI16Q16666 785 aaKnown RBP21.58■■□□□ 1.05
CDHR3-210ENST00000474330 PPP1R26Q5T8A7 1209 aaPredicted RBP21.58■■□□□ 1.05
CDHR3-210ENST00000474330 MON1BQ7L1V2 547 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 RHOT2Q8IXI1 618 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms