RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 POLR1AO95602 1720 aaPredicted RBP3.01□□□□□ -1.93
XRN1-210ENST00000472697 TRBV23OR9-2A0A075B6M9 112 aa3□□□□□ -1.93
XRN1-210ENST00000472697 A0A0A6YYJ9 748 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ISM1B1AKI9 464 aa3□□□□□ -1.93
XRN1-210ENST00000472697 J3KTA2 159 aa3□□□□□ -1.93
XRN1-210ENST00000472697 AP3D1O14617 1153 aa3□□□□□ -1.93
XRN1-210ENST00000472697 MAFKO60675 156 aa3□□□□□ -1.93
XRN1-210ENST00000472697 TAF5LO75529 589 aa3□□□□□ -1.93
XRN1-210ENST00000472697 STC2O76061 302 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CST5P28325 142 aaPredicted RBP3□□□□□ -1.93
XRN1-210ENST00000472697 WASP42768 502 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CHRNA4P43681 627 aa3□□□□□ -1.93
XRN1-210ENST00000472697 BPIFB3P59826 476 aa3□□□□□ -1.93
XRN1-210ENST00000472697 HNRNPUQ00839 825 aaKnown RBP eCLIP3□□□□□ -1.93
XRN1-210ENST00000472697 PPARDQ03181 441 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CHRNDQ07001 517 aa3□□□□□ -1.93
XRN1-210ENST00000472697 TRPC3Q13507 836 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZNF484Q5JVG2 852 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ATG16L1Q676U5 607 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SLC51AQ86UW1 340 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZSCAN30Q86W11 494 aa3□□□□□ -1.93
XRN1-210ENST00000472697 LINC00346Q8IVM7 164 aa3□□□□□ -1.93
XRN1-210ENST00000472697 KCTD6Q8NC69 237 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CCDC191Q8NCU4 936 aa3□□□□□ -1.93
XRN1-210ENST00000472697 NEDD1Q8NHV4 660 aa3□□□□□ -1.93
XRN1-210ENST00000472697 MTFMTQ96DP5 389 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 UHRF1Q96T88 793 aaPredicted RBP3□□□□□ -1.93
XRN1-210ENST00000472697 FOXB1Q99853 325 aa3□□□□□ -1.93
XRN1-210ENST00000472697 COLEC11Q9BWP8 271 aa3□□□□□ -1.93
XRN1-210ENST00000472697 LMAN2LQ9H0V9 348 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CARS2Q9HA77 564 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 C19orf73Q9NVV2 129 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZNF212Q9UDV6 495 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZC3H7BQ9UGR2 993 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 FEZ2Q9UHY8 353 aaPredicted RBP3□□□□□ -1.93
XRN1-210ENST00000472697 ZNF711Q9Y462 761 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ASB1Q9Y576 335 aa3□□□□□ -1.93
XRN1-210ENST00000472697 AGLP35573 1532 aa3□□□□□ -1.93
XRN1-210ENST00000472697 C3P01024 1663 aa3□□□□□ -1.93
XRN1-210ENST00000472697 GOLGA3Q08378 1498 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CDK12Q9NYV4 1490 aaPredicted RBP3□□□□□ -1.93
XRN1-210ENST00000472697 RNF17Q9BXT8 1623 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 ANKRD18BA2A2Z9 1011 aa3□□□□□ -1.93
XRN1-210ENST00000472697 AGAP14A8MT82 685 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SMTNL1A8MU46 457 aa3□□□□□ -1.93
XRN1-210ENST00000472697 M0QYG6 137 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SLC7A4O43246 635 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZBED4O75132 1171 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ABCA8O94911 1581 aa3□□□□□ -1.93
XRN1-210ENST00000472697 VNN1O95497 513 aa3□□□□□ -1.93
XRN1-210ENST00000472697 GAAP10253 952 aa3□□□□□ -1.93
XRN1-210ENST00000472697 EGR1P18146 543 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CIITAP33076 1130 aa3□□□□□ -1.93
XRN1-210ENST00000472697 PER3P56645 1201 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SCAPQ12770 1279 aa3□□□□□ -1.93
XRN1-210ENST00000472697 LRMPQ12912 555 aa3□□□□□ -1.93
XRN1-210ENST00000472697 NPATQ14207 1427 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SLC10A5Q5PT55 438 aa3□□□□□ -1.93
XRN1-210ENST00000472697 MFSD14BQ5SR56 506 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ANKRD45Q5TZF3 282 aa3□□□□□ -1.93
XRN1-210ENST00000472697 HLA-DQA1Q5Y7H0 255 aa3□□□□□ -1.93
XRN1-210ENST00000472697 MTFR2Q6P444 385 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZNF449Q6P9G9 518 aa3□□□□□ -1.93
XRN1-210ENST00000472697 RNF111Q6ZNA4 994 aa3□□□□□ -1.93
XRN1-210ENST00000472697 C4orf50Q6ZRC1 276 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SPRED2Q7Z698 418 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SRBD1Q8N5C6 995 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 PANK1Q8TE04 598 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SSH3Q8TE77 659 aa3□□□□□ -1.93
XRN1-210ENST00000472697 LRIG1Q96JA1 1093 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZBTB45Q96K62 511 aaPredicted RBP3□□□□□ -1.93
XRN1-210ENST00000472697 JAKMIP1Q96N16 626 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 OR10A5Q9H207 317 aa3□□□□□ -1.93
XRN1-210ENST00000472697 SARS2Q9NP81 518 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 SLAMF8Q9P0V8 285 aa3□□□□□ -1.93
XRN1-210ENST00000472697 C5AR2Q9P296 337 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ADGRE2Q9UHX3 823 aa3□□□□□ -1.93
XRN1-210ENST00000472697 MED16Q9Y2X0 877 aa3□□□□□ -1.93
XRN1-210ENST00000472697 CFAP20Q9Y6A4 193 aaKnown RBP3□□□□□ -1.93
XRN1-210ENST00000472697 ATRNL1Q5VV63 1379 aa3□□□□□ -1.93
XRN1-210ENST00000472697 ZNF785A8K8V0 405 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 KIAA0355O15063 1070 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 KIAA0391O15091 583 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 RPP40O75818 363 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 ENDOD1O94919 500 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CER1O95813 267 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 EDN2P20800 178 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 SLC6A2P23975 617 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ECHS1P30084 290 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 MLH1P40692 756 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 GARSP41250 739 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 PIK3CGP48736 1102 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ADAM15Q13444 863 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CYP4F22Q6NT55 531 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CATSPERGQ6ZRH7 1159 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 XYLT1Q86Y38 959 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 OR6B3Q8NGW1 331 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 SPPL3Q8TCT6 385 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ATP6V1E2Q96A05 226 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 SHISA4Q96DD7 197 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms