RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 GRASPQ7Z6J2 395 aaPredicted RBP12.73□□□□□ -0.37
CLRN1-205ENST00000472224 SIX5Q8N196 739 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 NELFBQ8WX92 580 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 RTP3Q9BQQ7 232 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLRN1-205ENST00000472224 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
CLRN1-205ENST00000472224 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
CLRN1-205ENST00000472224 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
CLRN1-205ENST00000472224 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 CHD8Q9HCK8 2581 aa12.73□□□□□ -0.37
CLRN1-205ENST00000472224 MTMR11A4FU01 709 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 CST3P01034 146 aaPredicted RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 CCNE1P24864 410 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 GCLMP48507 274 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 AP3M2P53677 418 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 MYL7Q01449 175 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TWF1Q12792 350 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 DUSP4Q13115 394 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 NCOA4Q13772 614 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 MORC3Q14149 939 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TCERG1LQ5VWI1 586 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ELMOD1Q8N336 334 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TTC9BQ8N6N2 239 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TOP6BLQ8N6T0 577 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ATAD1Q8NBU5 361 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 RUBCNQ92622 972 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 SEPT5Q99719 369 aaPredicted RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ZCWPW1Q9H0M4 648 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 NUP62CLQ9H1M0 184 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
CLRN1-205ENST00000472224 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 PTPRDP23468 1912 aa12.72□□□□□ -0.37
CLRN1-205ENST00000472224 HCRTO43612 131 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 SOAT2O75908 522 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 VNN2O95498 520 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 BMP6P22004 513 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 FSHRP23945 695 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 PPP1R2P41236 205 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 STX17P56962 302 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 LRRC63Q05C16 580 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 GPR17Q13304 367 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 MGAT5BQ3V5L5 792 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 PABPC1LQ4VXU2 614 aaKnown RBP12.71□□□□□ -0.37
CLRN1-205ENST00000472224 CENPPQ6IPU0 288 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 OTOP3Q7RTS5 596 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.37
CLRN1-205ENST00000472224 TMEM174Q8WUU8 243 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 ING5Q8WYH8 240 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.37
CLRN1-205ENST00000472224 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.37
CLRN1-205ENST00000472224 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 USTQ9Y2C2 406 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.37
CLRN1-205ENST00000472224 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 SPTBN2O15020 2390 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 MAPK13O15264 365 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 VNN1O95497 513 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 C4BPAP04003 597 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 PCSK1P29120 753 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 RAP1GAPP47736 663 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 LHX1P48742 406 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
CLRN1-205ENST00000472224 PAK1Q13153 545 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 TDGQ13569 410 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 ZACNQ401N2 412 aa12.7□□□□□ -0.38
CLRN1-205ENST00000472224 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms