RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	UNC13D	Q70J99	1090 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	BEND5	Q7L4P6	421 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	PALM2	Q8IXS6	379 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	MPP5	Q8N3R9	675 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	CCDC33	Q8N5R6	958 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	VGLL2	Q8N8G2	317 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	MORC4	Q8TE76	937 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	NACC2	Q96BF6	587 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	IQCD	Q96DY2	449 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	OSBPL9	Q96SU4	736 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	NELL2	Q99435	816 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	PSMD1	Q99460	953 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	EIF2A	Q9BY44	585 aa	Known RBP	4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	CERS4	Q9HA82	394 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	GALNT9	Q9HCQ5	603 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	ARFGAP3	Q9NP61	516 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	SHOC2	Q9UQ13	582 aa		4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	MTO1	Q9Y2Z2	717 aa	Known RBP	4.65	□□□□□ -1.67
PTCD3-209	ENST00000472044	IFRD1	O00458	451 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	FAM20B	O75063	409 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	INMT	O95050	263 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	BTF3	P20290	206 aa	Known RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	IL1R2	P27930	398 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	VAV2	P52735	878 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	INSC	Q1MX18	579 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	C10orf62	Q5T681	223 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	KLHDC7A	Q5VTJ3	777 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	RNF207	Q6ZRF8	634 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	MICALCL	Q6ZW33	695 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	RNF44	Q7L0R7	432 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	LIX1L	Q8IVB5	337 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	SMC5	Q8IY18	1101 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	YAF2	Q8IY57	180 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	FAM109A	Q8N4B1	249 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZNF276	Q8N554	614 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	ENAH	Q8N8S7	591 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	CACTIN	Q8WUQ7	758 aa	Known RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	KIAA1191	Q96A73	305 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	PPP1R9B	Q96SB3	815 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	ADAM2	Q99965	735 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	GDF15	Q99988	308 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	STK31	Q9BXU1	1019 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	TTYH3	Q9C0H2	523 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	WDR12	Q9GZL7	423 aa	Known RBP	4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	SMOC2	Q9H3U7	446 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZSCAN32	Q9NX65	697 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	GPRC5B	Q9NZH0	403 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	FZD1	Q9UP38	647 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	RIPOR2	Q9Y4F9	1068 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	NOX1	Q9Y5S8	564 aa		4.64	□□□□□ -1.67
PTCD3-209	ENST00000472044	LOC102723971	A0A1B0GUV8	181 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PLEKHD1	A6NEE1	506 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	TOR1B	O14657	336 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	KCNQ3	O43525	872 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	RASSF9	O75901	435 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	CDKL5	O76039	1030 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	A1BG	P04217	495 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	LAG3	P18627	525 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ITGAL	P20701	1170 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ABCB4	P21439	1286 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	DDX6	P26196	483 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PPM1A	P35813	382 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PXN	P49023	591 aa	Predicted RBP	4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZNF134	P52741	427 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	LILRA4	P59901	499 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	MC2R	Q01718	297 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	SATB1	Q01826	763 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	FPGS	Q05932	587 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	REST	Q13127	1097 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PMS2P11	Q13670	270 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	SLC29A2	Q14542	456 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	NPY5R	Q15761	445 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	MGAT5B	Q3V5L5	792 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PLA1A	Q53H76	456 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	C1orf228	Q6PIY5	440 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZDHHC24	Q6UX98	284 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	RHOU	Q7L0Q8	258 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	KRT28	Q7Z3Y7	464 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	COLGALT2	Q8IYK4	626 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ADGRG5	Q8IZF4	528 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	FANCB	Q8NB91	859 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	CPEB3	Q8NE35	698 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	CYP2W1	Q8TAV3	490 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ZNF384	Q8TF68	577 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	RAPGEF4	Q8WZA2	1011 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	SNX19	Q92543	992 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	LENG9	Q96B70	501 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ARPC5L	Q9BPX5	153 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	PTDSS2	Q9BVG9	487 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ALOXE3	Q9BYJ1	711 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	VPS11	Q9H270	941 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	UNKL	Q9H9P5	680 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	MID2	Q9UJV3	735 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	ITGB1BP2	Q9UKP3	347 aa		4.63	□□□□□ -1.67
PTCD3-209	ENST00000472044	MAP3K2	Q9Y2U5	619 aa		4.63	□□□□□ -1.67

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