RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CCDC175P0C221 793 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 PTPN1P18031 435 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 PBX3P40426 434 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 NOMO3P69849 1222 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 SPA17Q15506 151 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 INTS6LQ5JSJ4 861 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 VARS2Q5ST30 1063 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 FAM171A1Q5VUB5 890 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 TAF3Q5VWG9 929 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 DDX53Q86TM3 631 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 THEM5Q8N1Q8 247 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 ACRBPQ8NEB7 543 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 RNPC3Q96LT9 517 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 HNRNPABQ99729 332 aaKnown RBP20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 ZBED2Q9BTP6 218 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 CRTAC1Q9NQ79 661 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 PPP2R2CQ9Y2T4 447 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 RWDD3Q9Y3V2 267 aa20.64■□□□□ 0.89
CHMP2B-204ENST00000472024 OR6C75A6NL08 312 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 IPO7O95373 1038 aaKnown RBP20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 SETSIPP0DME0 302 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 CD19P15391 556 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 VAV2P52735 878 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 ORC1Q13415 861 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 USP41Q3LFD5 358 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 C12orf29Q8N999 325 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 OR10T2Q8NGX3 314 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 MYCBPAPQ8TBZ2 947 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 PIK3R5Q8WYR1 880 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 TMEM169Q96HH4 297 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 DESI2Q9BSY9 194 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 TTPALQ9BTX7 342 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 PLVAPQ9BX97 442 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 ZCWPW1Q9H0M4 648 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 LUC7LQ9NQ29 371 aaKnown RBP20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 PCDHB12Q9Y5F1 795 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 PCDHA13Q9Y5I0 950 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 BACE2Q9Y5Z0 518 aa20.63■□□□□ 0.89
CHMP2B-204ENST00000472024 C5orf67F2Z3F1 127 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 CCP110O43303 1012 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 ZSCAN12O43309 604 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 RTN2O75298 545 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 MICAL2O94851 1124 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 CFHP08603 1231 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 PDGFRBP09619 1106 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 CYP27A1Q02318 531 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 DSG1Q02413 1049 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 MAPRE1Q15691 268 aaKnown RBP20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 RTP2Q5QGT7 225 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 PPP1R26Q5T8A7 1209 aaPredicted RBP20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 ACAD10Q6JQN1 1059 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 ZNF280DQ6N043 979 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 ANKS3Q6ZW76 656 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 PHF13Q86YI8 300 aaPredicted RBP20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 FUKQ8N0W3 1084 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 CCAR2Q8N163 923 aaKnown RBP20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 TXLNBQ8N3L3 684 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 WDTC1Q8N5D0 677 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 CYFIP2Q96F07 1278 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 VCPIP1Q96JH7 1222 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 PUF60Q9UHX1 559 aaKnown RBP20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 TSPAN16Q9UKR8 245 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 LZTS1Q9Y250 596 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 PCDHA11Q9Y5I1 949 aa20.62■□□□□ 0.89
CHMP2B-204ENST00000472024 LCHNA4D1U4 455 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 LINC01553A4QN01 128 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 BTNL10A8MVZ5 291 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 H0YGN5 161 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 H7C4K7 107 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 ACAT1P24752 427 aaKnown RBP20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 GPD2P43304 727 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 MAGEA1P43355 309 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 RPL34P49207 117 aaKnown RBP20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 TCEAL1Q15170 157 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 CCDC122Q5T0U0 273 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 SPOUT1Q5T280 376 aaKnown RBP20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 PAQR9Q6ZVX9 377 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 TAS1R1Q7RTX1 841 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 REXO1L1PQ8IX06 675 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 ANKRD52Q8NB46 1076 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 TMEM35BQ8NCS4 154 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 STK32AQ8WU08 396 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 TAS2R14Q9NYV8 317 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 MTRRQ9UBK8 725 aa20.61■□□□□ 0.89
CHMP2B-204ENST00000472024 MYBPHLA2RUH7 354 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 ANKRD62A6NC57 917 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 GOLGA6L9A6NEM1 432 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 ATP2C2O75185 946 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 BMPR1AP36894 532 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 GSCP56915 257 aaPredicted RBP20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 PSMC1P62191 440 aaKnown RBP20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 TSPY1Q01534 308 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 SMARCB1Q12824 385 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 SLC8B1Q6J4K2 584 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 DENND1BQ6P3S1 775 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 TTC30AQ86WT1 665 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 SAMD11Q96NU1 681 aa20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 UBE2OQ9C0C9 1292 aaKnown RBP20.6■□□□□ 0.89
CHMP2B-204ENST00000472024 CYLDQ9NQC7 956 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms