RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 AMHR2Q16671 573 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ZNF394Q53GI3 561 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 DENND1BQ6P3S1 775 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ANKS1BQ7Z6G8 1248 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 EXOC3L1Q86VI1 746 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ZNF410Q86VK4 478 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 TDRPQ86YL5 185 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 EPS8L3Q8TE67 593 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 COPS5Q92905 334 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 MCRS1Q96EZ8 462 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ZNF317Q96PQ6 595 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 ADPGKQ9BRR6 497 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ADAM7Q9H2U9 754 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SYNCQ9H7C4 482 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SPON1Q9HCB6 807 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 DERAQ9Y315 318 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 LRRD1A4D1F6 860 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SMIM23A6NLE4 172 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 O00370 1275 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 B4GALT5O43286 388 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 RNF8O76064 485 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 ACSL3O95573 720 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 GHRP10912 638 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SSTR3P32745 418 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 PCK1P35558 622 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 MAGEA4P43358 317 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 LLGL1Q15334 1064 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 OASLQ15646 514 aaKnown RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 KYNUQ16719 465 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 P3H1Q32P28 736 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 DCAF4L1Q3SXM0 396 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 TTC31Q49AM3 519 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 PTPN20Q4JDL3 420 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SCARA5Q6ZMJ2 495 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 PDZD7Q9H5P4 517 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 UBN1Q9NPG3 1134 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SENP1Q9P0U3 644 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 DNPEPQ9ULA0 475 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 BARX2Q9UMQ3 279 aaPredicted RBP11.2□□□□□ -0.62
APLF-204ENST00000471727 AKT3Q9Y243 479 aa11.2□□□□□ -0.62
APLF-204ENST00000471727 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 A0A087WZ62 844 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 RRN3P2A6NIE6 340 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 ITGB3P05106 788 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 CETPP11597 493 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 TSHRP16473 764 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 DESP17661 470 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 EPHX2P34913 555 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 RFC1P35251 1148 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 ARSEP51690 589 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 OSTNP61366 133 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 OGDHQ02218 1023 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 SLC25A11Q02978 314 aaKnown RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 IFT88Q13099 833 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 IRF5Q13568 498 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 TMEM132DQ14C87 1099 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 TRIP13Q15645 432 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 LONRF1Q17RB8 773 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 LACTB2Q53H82 288 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 RNF187Q5TA31 235 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 KAZNQ674X7 775 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 JADE1Q6IE81 842 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 MAMDC4Q6UXC1 1216 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 BBS12Q6ZW61 710 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 CENPUQ71F23 418 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 PIGWQ7Z7B1 504 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 XYLT1Q86Y38 959 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 CMASQ8NFW8 434 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 UHMK1Q8TAS1 419 aaKnown RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 MDM1Q8TC05 714 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 TRAPPC12Q8WVT3 735 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 ACAP3Q96P50 834 aa11.19□□□□□ -0.62
APLF-204ENST00000471727 RBM15Q96T37 977 aaKnown RBP eCLIP11.19□□□□□ -0.62
APLF-204ENST00000471727 FDXACB1Q9BRP7 624 aaPredicted RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
APLF-204ENST00000471727 DNAI2Q9GZS0 605 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms