RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SLC10A6Q3KNW5 377 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 TNFAIP8L3Q5GJ75 292 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 SPOCD1Q6ZMY3 1216 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 CEP128Q6ZU80 1094 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 NLRP14Q86W24 1093 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 CCDC25Q86WR0 208 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 TTC39CQ8N584 583 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 SLC4A11Q8NBS3 891 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 MYCBPAPQ8TBZ2 947 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 CENPTQ96BT3 561 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 SDCBP2Q9H190 292 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 ITGA11Q9UKX5 1188 aa19.64■□□□□ 0.74
COL20A1-205ENST00000471582 ATXN2Q99700 1313 aaKnown RBP19.64■□□□□ 0.74
COL20A1-205ENST00000471582 MYO1CO00159 1063 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 TRAPPC3O43617 180 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 VTNP04004 478 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 TCF4P15884 667 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 KLRC2P26717 231 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 PTPN11Q06124 597 aaPredicted RBP19.64■□□□□ 0.73
COL20A1-205ENST00000471582 TMEM132DQ14C87 1099 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 TAF1CQ15572 869 aaPredicted RBP19.64■□□□□ 0.73
COL20A1-205ENST00000471582 CYP4A22Q5TCH4 519 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 MFSD7Q6UXD7 560 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 ZNF410Q86VK4 478 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 RELL1Q8IUW5 271 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 CPA4Q9UI42 421 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 EFR3BQ9Y2G0 817 aa19.64■□□□□ 0.73
COL20A1-205ENST00000471582 RASGRF2O14827 1237 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 TSPAN1O60635 241 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 KRT3P12035 628 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 MMP13P45452 471 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ACVR2BQ13705 512 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ZNF268Q14587 947 aaPredicted RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 DUSP28Q4G0W2 176 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ATP13A4Q4VNC1 1196 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 TFDP3Q5H9I0 405 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 IFNL1Q8IU54 200 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 NLRP7Q8WX94 980 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 TMEM176AQ96HP8 235 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 CPB2Q96IY4 423 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 HHIPL1Q96JK4 782 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 CCT8L2Q96SF2 557 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 hCG_1818297A0A087WSY0 165 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 A0A1B0GUA9 196 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 FAM155AB1AL88 458 aaPredicted RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 PI4K2BG5E9Z4 385 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 TTC4O95801 387 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 CORO7P57737 925 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 INCA1Q0VD86 236 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 SREBF2Q12772 1141 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 TRIP13Q15645 432 aaPredicted RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 IQSEC1Q6DN90 963 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ZNF473Q8WTR7 871 aaKnown RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ADPGKQ9BRR6 497 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 RABEP2Q9H5N1 569 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 KLHL11Q9NVR0 708 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 CYTH4Q9UIA0 394 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 GGA2Q9UJY4 613 aa19.63■□□□□ 0.73
COL20A1-205ENST00000471582 ABT1Q9ULW3 272 aaKnown RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 DRG1Q9Y295 367 aaKnown RBP19.63■□□□□ 0.73
COL20A1-205ENST00000471582 GMNCA6NCL1 334 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 E7EVH7 732 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 CSDE1O75534 798 aaKnown RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 HMGCRP04035 888 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 KRT7P08729 469 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 ATF7P17544 494 aaPredicted RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 RFC1P35251 1148 aaPredicted RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 CHKAP35790 457 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 CDKN2BP42772 138 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 GABRB2P47870 512 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 CDH8P55286 799 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 PSMC1P62191 440 aaKnown RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 GRIK4Q16099 956 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 MARCH8Q5T0T0 291 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 ZFYVE27Q5T4F4 411 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 UBAP2Q5T6F2 1119 aaKnown RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 EPS8L3Q8TE67 593 aaKnown RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 NKD2Q969F2 451 aaPredicted RBP19.62■□□□□ 0.73
COL20A1-205ENST00000471582 HPDLQ96IR7 371 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 ELOVL4Q9GZR5 314 aa19.62■□□□□ 0.73
COL20A1-205ENST00000471582 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 TLDC2A0PJX2 215 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 NDC80O14777 642 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 TCEA3O75764 348 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 MMP3P08254 477 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 VDRP11473 427 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 KRT10P13645 584 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 PSMA2P25787 234 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SEC24CP53992 1094 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 RBP5P82980 135 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SLC25A11Q02978 314 aaKnown RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 AUHQ13825 339 aaKnown RBP19.61■□□□□ 0.73
COL20A1-205ENST00000471582 ACAP1Q15027 740 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 CNGA2Q16280 664 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 SKIDA1Q1XH10 827 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 DCAF4L1Q3SXM0 396 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 GSTA5Q7RTV2 222 aa19.61■□□□□ 0.73
COL20A1-205ENST00000471582 XYLT1Q86Y38 959 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms