RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	TRMT13	Q9NUP7	481 aa	Known RBP	11.63	□□□□□ -0.55
SND1-208	ENST00000470463	KANSL3	Q9P2N6	904 aa		11.63	□□□□□ -0.55
SND1-208	ENST00000470463	TMEM59L	Q9UK28	342 aa		11.63	□□□□□ -0.55
SND1-208	ENST00000470463	MTUS1	Q9ULD2	1270 aa		11.63	□□□□□ -0.55
SND1-208	ENST00000470463	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.63	□□□□□ -0.55
SND1-208	ENST00000470463	PTCH2	Q9Y6C5	1203 aa		11.63	□□□□□ -0.55
SND1-208	ENST00000470463	PDCD11	Q14690	1871 aa	Known RBP	11.63	□□□□□ -0.55
SND1-208	ENST00000470463	TMEM191C	A6NGB0	347 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	ARL5C	A6NH57	179 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	SIGLEC16	A6NMB1	481 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463		A8MXQ7	604 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463		M0QYV0	167 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	PDE2A	O00408	941 aa	Predicted RBP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	PITPNM1	O00562	1244 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	PTGES	O14684	152 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	MICAL2	O94851	1124 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	SCNN1A	P37088	669 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	ACADSB	P45954	432 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	GUCY2F	P51841	1108 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	LILRA4	P59901	499 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	NAA30	Q147X3	362 aa	Predicted RBP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	SOWAHA	Q2M3V2	549 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	ZNF618	Q5T7W0	954 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	SLC24A5	Q71RS6	500 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	WNT8B	Q93098	351 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	RNPC3	Q96LT9	517 aa	Known RBP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	ADAM2	Q99965	735 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	RNF39	Q9H2S5	420 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	ANKZF1	Q9H8Y5	726 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	AGO3	Q9H9G7	860 aa	Known RBP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	PAK6	Q9NQU5	681 aa	Predicted RBP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	RGS18	Q9NS28	235 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	HOMER3	Q9NSC5	361 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
SND1-208	ENST00000470463	KLK14	Q9P0G3	267 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	DSE	Q9UL01	958 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	NR2E3	Q9Y5X4	410 aa		11.62	□□□□□ -0.55
SND1-208	ENST00000470463	TMEM110-MUSTN1	A8MSY1	372 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	KRIT1	O00522	736 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	DLL1	O00548	723 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	ATMIN	O43313	823 aa	Predicted RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	RHOXF2B	P0C7M4	288 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	KRT3	P12035	628 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	SELP	P16109	830 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	TNFRSF8	P28908	595 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	MLH1	P40692	756 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	GPD2	P43304	727 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	PEX5	P50542	639 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	CDK7	P50613	346 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	DNA2	P51530	1060 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	BCAT1	P54687	386 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	PDCL	Q13371	301 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	HADH	Q16836	314 aa	Known RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	LONRF2	Q1L5Z9	754 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	DENND1B	Q6P3S1	775 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	AGMO	Q6ZNB7	445 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	IFT20	Q8IY31	132 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	ADGRF2	Q8IZF7	708 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	NOA1	Q8NC60	698 aa	Known RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	URGCP	Q8TCY9	931 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	TSC1	Q92574	1164 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	RBM41	Q96IZ5	413 aa	Known RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	GAD1	Q99259	594 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	RHOXF2	Q9BQY4	288 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	HTATIP2	Q9BUP3	242 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	GOLPH3	Q9H4A6	298 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	ELAC1	Q9H777	363 aa	Known RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	DDX56	Q9NY93	547 aa	Known RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	STIM2	Q9P246	746 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.61	□□□□□ -0.55
SND1-208	ENST00000470463	TSPAN16	Q9UKR8	245 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	OGDHL	Q9ULD0	1010 aa		11.61	□□□□□ -0.55
SND1-208	ENST00000470463	TCRBV5S1A1T	A0A578	114 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	PODXL	O00592	558 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	CYB561D2	O14569	222 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	FGG	P02679	453 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	PCSK1	P29120	753 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	GBP1	P32455	592 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	COPS2	P61201	443 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	PSMC1	P62191	440 aa	Known RBP	11.6	□□□□□ -0.55
SND1-208	ENST00000470463	C2orf54	Q08AI8	447 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	BST2	Q10589	180 aa	Known RBP	11.6	□□□□□ -0.55
SND1-208	ENST00000470463	ODF2	Q5BJF6	829 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	PPP1R15B	Q5SWA1	713 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	SCARA3	Q6AZY7	606 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	FBXO38	Q6PIJ6	1188 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	GLB1L	Q6UWU2	654 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	CHRDL2	Q6WN34	429 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	LRRC8D	Q7L1W4	858 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	ARC	Q7LC44	396 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	POLN	Q7Z5Q5	900 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	METTL23	Q86XA0	190 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	ECHDC2	Q86YB7	292 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	KATNAL2	Q8IYT4	538 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	WDTC1	Q8N5D0	677 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	ANKRD52	Q8NB46	1076 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	MCRS1	Q96EZ8	462 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	MS4A14	Q96JA4	679 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	HSFY1	Q96LI6	401 aa		11.6	□□□□□ -0.55
SND1-208	ENST00000470463	TWNK	Q96RR1	684 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms