RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TMX1Q9H3N1 280 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 HIPK3Q9H422 1215 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PDZD7Q9H5P4 517 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 AGPAT5Q9NUQ2 364 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PRMT7Q9NVM4 692 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PADI3Q9ULW8 664 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ST3GAL5Q9UNP4 418 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 EFR3BQ9Y2G0 817 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CNTNAP2Q9UHC6 1331 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TRIP12Q14669 1992 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 A0A0B4J269 797 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 GOLGA8IPA6NC78 632 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 GOLGA8JA6NMD2 632 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 M0QZ92 97 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 MEFVO15553 781 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CAND2O75155 1236 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 RPS6KA5O75582 802 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TOM1L1O75674 476 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 KIF20AO95235 890 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ADCY5O95622 1261 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ECEL1O95672 775 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 BPNT1O95861 308 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 RPLP2P05387 115 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ADRB2P07550 413 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CLTBP09497 229 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SCP2P22307 547 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PPP1R2P41236 205 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TNFSF9P41273 254 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CD97P48960 835 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 LIG4P49917 911 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CYP2J2P51589 502 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 FKBP3Q00688 224 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CCDC173Q0VFZ6 552 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ADAM9Q13443 819 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 NFIL3Q16649 462 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 UBXN11Q5T124 520 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ATF7IP2Q5U623 682 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CDKAL1Q5VV42 579 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ARMCX5Q6P1M9 558 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 FOXR2Q6PJQ5 311 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ZPBP2Q6X784 338 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CATSPER4Q7RTX7 472 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 APTXQ7Z2E3 356 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 REC114Q7Z4M0 266 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CBWD2Q8IUF1 395 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 C12orf56Q8IXR9 622 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TMEM192Q8IY95 271 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 C17orf53Q8N3J3 647 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PLEKHO2Q8TD55 490 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TMEM174Q8WUU8 243 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 EVPLQ92817 2033 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SAAL1Q96ER3 474 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 BICD1Q96G01 975 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 BORCS6Q96GS4 357 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 FAM84AQ96KN4 292 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 FBXL18Q96ME1 805 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 EIF2AQ9BY44 585 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 MRPL4Q9BYD3 311 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 NAT10Q9H0A0 1025 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CDT1Q9H211 546 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CXCL16Q9H2A7 254 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ERVK-5Q9HDB9 667 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 HSPBP1Q9NZL4 362 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ANKFY1Q9P2R3 1169 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TNFSF13BQ9Y275 285 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 HES2Q9Y543 173 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SIP14410 1827 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 BICDL2A1A5D9 508 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CCDC85CA6NKD9 419 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 MEIS3P2A8K0S8 358 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 BECN2A8MW95 431 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 F8W735 103 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 TLR3O15455 904 aaKnown RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CLDN3O15551 220 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CALUO43852 315 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 ERLIN2O94905 339 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CAVIN2O95810 425 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CTSBP07858 339 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 HARSP12081 509 aaKnown RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 CAPN2P17655 700 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 SFPQP23246 707 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 SSTR4P31391 388 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 ACOT2P49753 483 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 MCL1Q07820 350 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 BFSP2Q13515 415 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 PTPN21Q16825 1174 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 MPZL3Q6UWV2 235 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 Q6ZS46 218 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 RTN4RL1Q86UN2 441 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 SPC24Q8NBT2 197 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 DBF4BQ8NFT6 615 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 FBXO27Q8NI29 283 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 LINC01599Q8WXQ3 324 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 POMGNT1Q8WZA1 660 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 IFIH1Q9BYX4 1025 aaKnown RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 KCNK4Q9NYG8 393 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 AGO2Q9UKV8 859 aaKnown RBP5.13□□□□□ -1.59
SF3B1-208ENST00000470268 EXOC7Q9UPT5 735 aa5.13□□□□□ -1.59
SF3B1-208ENST00000470268 PIN4Q9Y237 131 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms