RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PIP4P1Q86T03 277 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 SYT12Q8IV01 421 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ERMNQ8TAM6 284 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 BSNDQ8WZ55 320 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ZMAT2Q96NC0 199 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ACO2Q99798 780 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 SLC46A2Q9BY10 475 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 HPS4Q9NQG7 708 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ASH1LQ9NR48 2969 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 TDP1Q9NUW8 608 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 IGSF10Q6WRI0 2623 aa9.66□□□□□ -0.86
SYNGAP1-205ENST00000470232 MTMR11A4FU01 709 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 XPOTO43592 962 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 LETM1O95202 739 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 LARGE1O95461 756 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CAPNS1P04632 268 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 EDN1P05305 212 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 PTMAP06454 111 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 OR4Q2P0C623 313 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 GJB2P29033 226 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 GJA4P35212 333 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 HOXD12P35452 270 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CYP4F8P98187 520 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 GFPT1Q06210 699 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 SMARCB1Q12824 385 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 DUOXA1Q1HG43 343 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 TRIM68Q6AZZ1 485 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 OVOS1Q6IE37 1185 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CATSPER3Q86XQ3 398 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CEP120Q8N960 986 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 ATAD1Q8NBU5 361 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 RNF214Q8ND24 703 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 HNRNPLLQ8WVV9 542 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 WASF1Q92558 559 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 ATP2A3Q93084 1043 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 C18orf25Q96B23 403 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CHFRQ96EP1 664 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CNOT6LQ96LI5 555 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 AIFM3Q96NN9 605 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 TPSD1Q9BZJ3 242 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CDT1Q9H211 546 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 ECT2Q9H8V3 914 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 FBRSL1Q9HCM7 1045 aaKnown RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 TBX20Q9UMR3 447 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 TIMM13Q9Y5L4 95 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-205ENST00000470232 CCDC169A6NNP5 214 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 NEMFO60524 1076 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 VNN2O95498 520 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SYPP08247 313 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SPATA31C1P0DKV0 1188 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 TYMPP19971 482 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SYT1P21579 422 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MUTP22033 750 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 KRT2P35908 639 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 UBE2HP62256 183 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 ZNF268Q14587 947 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MGAT5BQ3V5L5 792 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 ANO7Q6IWH7 933 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MPZL3Q6UWV2 235 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 RASSF3Q86WH2 238 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 TTC30AQ86WT1 665 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MAB21L3Q8N8X9 362 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 C2orf15Q8WU43 125 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 LRIG1Q96JA1 1093 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SEPT5Q99719 369 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 KIFC3Q9BVG8 833 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 GTPBP2Q9BX10 602 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SMG9Q9H0W8 520 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 CRISPLD1Q9H336 500 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 PLEKHA5Q9HAU0 1116 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 PTPRHQ9HD43 1115 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 DUS2Q9NX74 493 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 KCNG1Q9UIX4 513 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 CITO14578 2027 aa9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 ZNF638Q14966 1978 aaKnown RBP9.64□□□□□ -0.87
SYNGAP1-205ENST00000470232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 VPS37CA5D8V6 355 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 OTOL1A6NHN0 477 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 CFIP05156 583 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 ODC1P11926 461 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 ARSAP15289 507 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 CYP3A5P20815 502 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 BCKDHBP21953 392 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 RPA1P27694 616 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 LRPAP1P30533 357 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 IFNAR2P48551 515 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms