RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 HIPK3Q9H422 1215 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 VAV3Q9UKW4 847 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 NAALADL1Q9UQQ1 740 aa10.13□□□□□ -0.79
HDAC3-205ENST00000469550 DPPA5A6NC42 116 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ENO4A6NNW6 628 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PMM2O15305 246 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PRPF4O43172 522 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 THAP12O43422 761 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ASMTLO95671 621 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 GAS8O95995 478 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 MUTP22033 750 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 EDNRBP24530 442 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CDC25CP30307 473 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 FOXN2P32314 431 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CHKAP35790 457 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 RAD23BP54727 409 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SNAP25P60880 206 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ROR2Q01974 943 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 BIRC2Q13490 618 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 BAATQ14032 418 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 KYNUQ16719 465 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PRR16Q569H4 304 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 C1orf186Q6ZWK4 172 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CYP4X1Q8N118 509 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SLC20A1Q8WUM9 679 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PSPC1Q8WXF1 523 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CLEC4DQ8WXI8 215 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 MAML1Q92585 1016 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SLC7A6OSQ96CW6 309 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 FIZ1Q96SL8 496 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 FAM167BQ9BTA0 163 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 YIPF3Q9GZM5 350 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PARVGQ9HBI0 331 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ETAA1Q9NY74 926 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 KCND2Q9NZV8 630 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 GTF3C4Q9UKN8 822 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CHKBQ9Y259 395 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ASB3Q9Y575 518 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PCDHA1Q9Y5I3 950 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 TMEM110-MUSTN1A8MSY1 372 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 NFIBO00712 420 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SPOPO43791 374 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 B4GALT4O60513 344 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ACRP10323 421 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PCK1P35558 622 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SREBF1P36956 1147 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 PAPOLAP51003 745 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 WDR4P57081 412 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 KLC1Q07866 573 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 QRICH1Q2TAL8 776 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 CWF19L1Q69YN2 538 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 TDRPQ86YL5 185 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 MYCT1Q8N699 235 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 RBBP8NLQ8NC74 664 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ZNF398Q8TD17 642 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 DENND1AQ8TEH3 1009 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ERP27Q96DN0 273 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 NUDCD1Q96RS6 583 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 TSC22D3Q99576 134 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 HSD17B14Q9BPX1 270 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 EIF2AK1Q9BQI3 630 aaKnown RBP10.12□□□□□ -0.79
HDAC3-205ENST00000469550 DCLRE1BQ9H816 532 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 MLXIPLQ9NP71 852 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 SAR1AQ9NR31 198 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ASIC3Q9UHC3 531 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 LNPEPQ9UIQ6 1025 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 ANAPC5Q9UJX4 755 aa10.12□□□□□ -0.79
HDAC3-205ENST00000469550 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 FGBP02675 491 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 PFKMP08237 780 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 CYP3A4P08684 503 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 TRIM49P0CI25 452 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 TRIM49CP0CI26 452 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 T-ENOLP0DO92 83 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 NMT1P30419 496 aaKnown RBP10.11□□□□□ -0.79
HDAC3-205ENST00000469550 SLC16A2P36021 539 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 PBX2P40425 430 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 CPT1AP50416 773 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 ITGA8P53708 1063 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-205ENST00000469550 PURAQ00577 322 aaKnown RBP10.11□□□□□ -0.79
HDAC3-205ENST00000469550 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 SGO2Q562F6 1265 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 TMEM63BQ5T3F8 832 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 IRGCQ6NXR0 463 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 GALNT15Q8N3T1 639 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 DNERQ8NFT8 737 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 ATL2Q8NHH9 583 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 ZNF564Q8TBZ8 553 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-205ENST00000469550 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 PARD3BQ8TEW8 1205 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 DNAJC9Q8WXX5 260 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 VWCEQ96DN2 955 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 PCDHB18PQ96TA0 734 aa10.11□□□□□ -0.79
HDAC3-205ENST00000469550 GAS2L1Q99501 681 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-205ENST00000469550 STRA6Q9BX79 667 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms