RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 DMWDQ09019 674 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 TMEM196Q5HYL7 178 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 Q6ZS52 159 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 LRRTM3Q86VH5 581 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 SPATA18Q8TC71 538 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 MRPL44Q9H9J2 332 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 ABCB6Q9NP58 842 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
GAPVD1-214ENST00000469528 NCOR2Q9Y618 2525 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 RHOBTB1O94844 696 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 GAP43P17677 238 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 TXLNAP40222 546 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 LHX1P48742 406 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 PDE6CP51160 858 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 SRSF5Q13243 272 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 ZC2HC1CQ53FD0 456 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 CPA6Q8N4T0 437 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 LEO1Q8WVC0 666 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 ZC3H10Q96K80 434 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 EBF3Q9H4W6 596 aa13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 MAGED2Q9UNF1 606 aaPredicted RBP13.64□□□□□ -0.23
GAPVD1-214ENST00000469528 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 EXTL3O43909 919 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 RAP1GAPP47736 663 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 GALK1P51570 392 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 RBP5P82980 135 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 ALCAMQ13740 583 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 RRAGBQ5VZM2 374 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 TXNDC8Q6A555 127 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 USP13Q92995 863 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 TRMT2BQ96GJ1 504 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 MYRFLQ96LU7 910 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 P2RY13Q9BPV8 354 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 SMG9Q9H0W8 520 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 TMEM206Q9H813 350 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 DDX43Q9NXZ2 648 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 EHD2Q9NZN4 543 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
GAPVD1-214ENST00000469528 COL4A2P08572 1712 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 KIAA0391O15091 583 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 EPN2O95208 641 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 PDCP20941 246 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 GARTP22102 1010 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 PCSK1P29120 753 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 MAPRE1Q15691 268 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 ELF2Q15723 593 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 CRELD2Q6UXH1 353 aaPredicted RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 DYMQ7RTS9 669 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 C11orf74Q86VG3 221 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 SPATA2LQ8IUW3 424 aaPredicted RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 ATP2A3Q93084 1043 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 ACDQ96AP0 544 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 FUBP3Q96I24 572 aaKnown RBP eCLIP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 CEP295NLQ96MC4 621 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 FAM213AQ9BRX8 229 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 VPS45Q9NRW7 570 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 DUS2Q9NX74 493 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 ITGA11Q9UKX5 1188 aa13.62□□□□□ -0.23
GAPVD1-214ENST00000469528 NUP210Q8TEM1 1887 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 GDF9O60383 454 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 PFKLP17858 780 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 ADSSP30520 456 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 IFNAR2P48551 515 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 SURF1Q15526 300 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 DDR2Q16832 855 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 ST3GAL2Q16842 350 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 C4orf50Q6ZRC1 276 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 STXBP4Q6ZWJ1 553 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 SYT13Q7L8C5 426 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 TMEM150AQ86TG1 271 aa13.61□□□□□ -0.23
GAPVD1-214ENST00000469528 SFR1Q86XK3 245 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms