RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 GALK1P51570 392 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 CASP5P51878 434 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 TFAMQ00059 246 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PTPAQ15257 358 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 CEP68Q76N32 757 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 SLC22A12Q96S37 553 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 ARRDC1-AS1Q9H2J1 176 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 ST6GALNAC4Q9H4F1 302 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 SMOC1Q9H4F8 434 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PCIF1Q9H4Z3 704 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 MRPL44Q9H9J2 332 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 THG1LQ9NWX6 298 aaKnown RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 GTF3C4Q9UKN8 822 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 SLC30A4O14863 429 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 TADA3O75528 432 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 KCNA4P22459 653 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 PAX3P23760 479 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 AVPR1AP37288 418 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 MCM2P49736 904 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 CSRP2Q16527 193 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 TMEM196Q5HYL7 178 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 PPM1JQ5JR12 505 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 KBTBD6Q86V97 674 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 WDR5BQ86VZ2 330 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 C1orf127Q8N9H9 656 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 DNAJC19Q96DA6 116 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 GCNAQ96QF7 691 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 FBXO2Q9UK22 296 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-204ENST00000469207 L1RE1Q9UN81 338 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 RALGAPA1Q6GYQ0 2036 aa13.21□□□□□ -0.29
HDAC3-204ENST00000469207 TCHHQ07283 1943 aa13.21□□□□□ -0.3
HDAC3-204ENST00000469207 A0A087X0B3 334 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-204ENST00000469207 RNF40O75150 1001 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 ATP2C2O75185 946 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 GCNT3O95395 438 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 SCP2P22307 547 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 CNR2P34972 360 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 BFSP1Q12934 665 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 SV2CQ496J9 727 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 CSGALNACT2Q8N6G5 542 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 NETO1Q8TDF5 533 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 C2orf15Q8WU43 125 aaKnown RBP13.2□□□□□ -0.3
HDAC3-204ENST00000469207 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-204ENST00000469207 CBWD1Q9BRT8 395 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
HDAC3-204ENST00000469207 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-204ENST00000469207 TRDMT1O14717 391 aaKnown RBP13.19□□□□□ -0.3
HDAC3-204ENST00000469207 PRPF6O94906 941 aaKnown RBP13.19□□□□□ -0.3
HDAC3-204ENST00000469207 IL18RAPO95256 599 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 ADRB1P08588 477 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 KRT19P08727 400 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 IDEP14735 1019 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 GJA4P35212 333 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 TSPY1Q01534 308 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC3-204ENST00000469207 POSTNQ15063 836 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
HDAC3-204ENST00000469207 RRAGBQ5VZM2 374 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 SYNPOQ8N3V7 929 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 HPS3Q969F9 1004 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 PKMYT1Q99640 499 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
HDAC3-204ENST00000469207 DENND4CQ5VZ89 1909 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 DCLK1O15075 740 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 HUS1O60921 280 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 LRP3O75074 770 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 RPP40O75818 363 aaKnown RBP13.18□□□□□ -0.3
HDAC3-204ENST00000469207 BMP15O95972 392 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 CSH1P0DML2 217 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 CSH2P0DML3 217 aa13.18□□□□□ -0.3
HDAC3-204ENST00000469207 LMO2P25791 158 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms