RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RUBCNQ92622 972 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 TCEAL4Q96EI5 215 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 YIPF1Q9Y548 306 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 R4GN57 208 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 ZNF263O14978 683 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 MOSPD3O75425 235 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 SMC2O95347 1197 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 NR3C1P04150 777 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 TARSP26639 723 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 NRLP54845 237 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 DUSP4Q13115 394 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 CEP135Q66GS9 1140 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 CENPPQ6IPU0 288 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 TRAPPC11Q7Z392 1133 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 WDR49Q8IV35 697 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 SMYD4Q8IYR2 804 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 ATRIPQ8WXE1 791 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 NELL1Q92832 810 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 SMARCE1Q969G3 411 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 PGLYRP2Q96PD5 576 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 TMEM209Q96SK2 561 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 ZNF334Q9HCZ1 680 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 HEBP1Q9NRV9 189 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 DMAC2Q9NW81 257 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 ZSCAN32Q9NX65 697 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 OBP2AQ9NY56 170 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 SIX4Q9UIU6 781 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 MTF2Q9Y483 593 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 PCDHA5Q9Y5H7 936 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 DCHS1Q96JQ0 3298 aa15.1■□□□□ 0.01
CCHCR1-211ENST00000467553 F5P12259 2224 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CHADO15335 359 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 HUS1O60921 280 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 PRPF40AO75400 957 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CST3P01034 146 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 MYL4P12829 197 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CASP4P49662 377 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CDR1P51861 262 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 ISM2Q6H9L7 571 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 POTEHQ6S545 545 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 VITQ6UXI7 678 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 SLC9A9Q8IVB4 645 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 GUF1Q8N442 669 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 LRRC52Q8N7C0 313 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 ZBTB44Q8NCP5 570 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CXorf38Q8TB03 319 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 ZSCAN18Q8TBC5 510 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 SECISBP2LQ93073 1101 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 PSMG2Q969U7 264 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 HPDLQ96IR7 371 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 GSDMAQ96QA5 445 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 LRRC3Q9BY71 257 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 C8orf33Q9H7E9 229 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 PRMT8Q9NR22 394 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 SNX9Q9Y5X1 595 aa15.09■□□□□ 0.01
CCHCR1-211ENST00000467553 OTOGLQ3ZCN5 2332 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 MTMR11A4FU01 709 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 PHACTR2O75167 634 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 LRRN2O75325 713 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 VNN2O95498 520 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 CD72P21854 359 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 GDI1P31150 447 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 CSTF1Q05048 431 aaKnown RBP15.08■□□□□ 0
CCHCR1-211ENST00000467553 MYO1EQ12965 1108 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 FZD5Q13467 585 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
CCHCR1-211ENST00000467553 TMC8Q8IU68 726 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 YAF2Q8IY57 180 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 ZNF687Q8N1G0 1237 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 SUMF1Q8NBK3 374 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 SHKBP1Q8TBC3 707 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 ZSWIM3Q96MP5 696 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 CHRDQ9H2X0 955 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 SLITRK6Q9H5Y7 841 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 TRAF3IP3Q9Y228 551 aa15.08■□□□□ 0
CCHCR1-211ENST00000467553 DMXL1Q9Y485 3027 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 SOBPA7XYQ1 873 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 HEPACAM2A8MVW5 462 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 LILRB5O75023 590 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 SDHBP21912 280 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 NR2F2P24468 414 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 PRCPP42785 496 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 FCHO2Q0JRZ9 810 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 ADAM9Q13443 819 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 TRPC3Q13507 836 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 GRM2Q14416 872 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 VEPH1Q14D04 833 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 TEAD2Q15562 447 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 SLC39A12Q504Y0 691 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 ARHGAP15Q53QZ3 475 aa15.07■□□□□ 0
CCHCR1-211ENST00000467553 DNAJB7Q7Z6W7 309 aaPredicted RBP15.07■□□□□ 0
CCHCR1-211ENST00000467553 PDCL2Q8N4E4 241 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms