RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
MSH5-212ENST00000467319 MIIPQ5JXC2 388 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 UBR7Q8N806 425 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 B3GALNT2Q8NCR0 500 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 CCDC150Q8NCX0 1101 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 MYLPFQ96A32 169 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 FUBP3Q96I24 572 aaKnown RBP eCLIP11.8□□□□□ -0.52
MSH5-212ENST00000467319 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
MSH5-212ENST00000467319 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
MSH5-212ENST00000467319 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
MSH5-212ENST00000467319 SYCE3A1L190 88 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 CCL16O15467 120 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 XYLBO75191 536 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 CILPO75339 1184 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 HAPLN1P10915 354 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 ELF1P32519 619 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 MAGEA11P43364 429 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 EPHA5P54756 1037 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 PLD1Q13393 1074 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 CUL2Q13617 745 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 TPD52L1Q16890 204 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 TCP11X2Q5H9J9 407 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 OR6B3Q8NGW1 331 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 WHAMMQ8TF30 809 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 PCED1BQ96HM7 432 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 TWNKQ96RR1 684 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 AVENQ9NQS1 362 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.522e-8■■■■■ 37
MSH5-212ENST00000467319 ABI2Q9NYB9 513 aaPredicted RBP11.79□□□□□ -0.52
MSH5-212ENST00000467319 GCNT4Q9P109 453 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 CEP72Q9P209 647 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 PCDHB5Q9Y5E4 795 aa11.79□□□□□ -0.52
MSH5-212ENST00000467319 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
MSH5-212ENST00000467319 A8MXQ7 604 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 KCNJ18B7U540 433 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 LOC730098B7Z3J9 87 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 SOAT2O75908 522 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 CLSTN1O94985 981 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 LRG1P02750 347 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
MSH5-212ENST00000467319 MTIF2P46199 727 aaKnown RBP11.78□□□□□ -0.52
MSH5-212ENST00000467319 NDST1P52848 882 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 GCNT1Q02742 428 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TWF1Q12792 350 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 KCNJ12Q14500 433 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 NFKBIBQ15653 356 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 MDH1BQ5I0G3 518 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 C4orf50Q6ZRC1 276 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TMC8Q8IU68 726 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 CRYBG2Q8N1P7 616 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TTC39CQ8N584 583 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TATDN2Q93075 761 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TNIP3Q96KP6 325 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
MSH5-212ENST00000467319 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 CISHQ9NSE2 258 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 TMEM30AQ9NV96 361 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
MSH5-212ENST00000467319 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
MSH5-212ENST00000467319 DOCK6Q96HP0 2047 aa11.77□□□□□ -0.52
MSH5-212ENST00000467319 NRG2O14511 850 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 PDGFRBP09619 1106 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 ACO1P21399 889 aaKnown RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 TUFMP49411 452 aaKnown RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 CDR1P51861 262 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 NTHL1P78549 312 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 CETN1Q12798 172 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 MGAT5BQ3V5L5 792 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 PRSS36Q5K4E3 855 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 VSTM1Q6UX27 236 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 APTXQ7Z2E3 356 aaKnown RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 GRASPQ7Z6J2 395 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 SPATA2LQ8IUW3 424 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms